Pairwise Alignments

Query, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (324), Expect = 3e-34
 Identities = 105/365 (28%), Positives = 169/365 (46%), Gaps = 32/365 (8%)

Query: 53  VAAAARGDLGARIMGIGGTGEIPRMHYNINHLLDVTEAFARESGAALSFASRGEYYRKIL 112
           +  A +GDL  RI   G  G +  +   IN+LL+       +    +S  + G+    + 
Sbjct: 293 IQKAIKGDLHDRINTSGYNGFMRELGDGINNLLNTLVEPLGQCITVMSRVAEGDLNTSMS 352

Query: 113 RRGMVGDFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASS 172
                G+FGR    VNA +  +         S++ +      +       + +++A AS+
Sbjct: 353 EEYQ-GEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGNNDLSQRVEAQASN 411

Query: 173 LGDMARSTDDQSVRV---ADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNA 229
           L + A S ++ +  V   AD A+DA+                 TD A +  R  +V   A
Sbjct: 412 LEETAASMEEITATVRQNADNAKDANLLA--------------TDAAKKAARGGEVVGEA 457

Query: 230 VVTAGKAESTINTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVA 289
           +   G     INT   AS +I +++ +I++IA QTNLLALNA +EAARAGE G+GFAVVA
Sbjct: 458 ISAMG----AINT---ASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVA 510

Query: 290 GEVKTLAQQTARATDEIVGQIEGMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQR 349
           GEV+ LAQ++A A  EI G I       +E    +   G T++EI EA   +        
Sbjct: 511 GEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSD------ 564

Query: 350 AVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVA 409
            ++ +IA +      G+  +   IA +    ++    VEE + A+  L    + L   + 
Sbjct: 565 -LIAQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMN 623

Query: 410 RFITQ 414
            F+T+
Sbjct: 624 FFVTE 628