Pairwise Alignments

Query, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  127 bits (318), Expect = 9e-34
 Identities = 100/320 (31%), Positives = 149/320 (46%), Gaps = 32/320 (10%)

Query: 116 MVGDFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGD 175
           MV D  +  + +NA L     K +     A E  +++      VA+AAA   A    + D
Sbjct: 159 MVNDLKKQIEYLNAEL----LKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSD 214

Query: 176 MARSTDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGK 235
              +T + +  V DAA D    V+      E     +  V + +E T Q   N +   GK
Sbjct: 215 QLEATSEITSAVTDAADDT---VTAAIEIEENSEMGVKKVENAIE-TMQSITNVIENLGK 270

Query: 236 AESTINTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTL 295
           A   I  L   S +I EV  LI D+A QT LLALNA+IEAARAG+AGKGFAVVA E+K+L
Sbjct: 271 A---IQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSL 327

Query: 296 AQQTARATDEIVGQIEGMRTATHEAV-LAIQGIGE------TIREISEAAQAIHHAISEQ 348
           A++  ++ ++I   I G+       + L I G  E       I E++ A   I  ++   
Sbjct: 328 AEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETT 387

Query: 349 RAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAA-------------- 394
              +  I  N  RAV+ V    +    +A    E     EE+T +A              
Sbjct: 388 SEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAI 447

Query: 395 NDLSCNSEGLSGDVARFITQ 414
            +++ +SE +S DV++F T+
Sbjct: 448 EEITKSSEQISKDVSKFKTE 467