Pairwise Alignments

Query, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 246 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  106 bits (265), Expect = 5e-28
 Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 13/212 (6%)

Query: 68  ILPTPVQVGAELWKSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFR 127
           +LP+P  V + LW         +   L  HT +T +  L G VLG LLG+ +A+ ++   
Sbjct: 31  LLPSPSAVASALW--------VNRSYLGEHTLITLSEILSGLVLGALLGVTLALCMIVSP 82

Query: 128 VLEASLLPWVIASQTIPILAIAPMVVVVLGAIGLTGLVPKAIISMYLCFFPVTVGMVKGL 187
            L+  L+P V+ SQ IP+ A+AP++V+  G     G+  K ++++ + FFPVT     GL
Sbjct: 83  RLQRWLMPLVLTSQAIPVFALAPLLVLWFGF----GMGAKVMMAVLVIFFPVTSAFFDGL 138

Query: 188 RSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGELPTGAAM 247
           R  +   +DL RT  A        +R+ AALP L + +++A A A +GAI+GE   G+A 
Sbjct: 139 RRVNRDYLDLARTMGASFGAQLRHVRMMAALPALGSGLRMAAAVAPIGAIIGEW-VGSAE 197

Query: 248 GLGARLLAGSYYGQTVQMWAALVMAAALSLFL 279
           GLG  +L  +   QT   +AAL +   L++ L
Sbjct: 198 GLGYVMLNANARLQTDICFAALFILVVLTVLL 229