Pairwise Alignments

Query, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

Subject, 286 a.a., RNase adapter RapZ from Pseudomonas aeruginosa PA14

 Score =  210 bits (535), Expect = 3e-59
 Identities = 118/285 (41%), Positives = 168/285 (58%), Gaps = 8/285 (2%)

Query: 55  RVIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLF-----EALTQGRWDQPRPLVLGID 109
           R+I+V+G SG+G++T L  LED G+  +DNLP SL       AL      QP+ + + ID
Sbjct: 2   RLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPASLLPDLAQRALLHTELLQPQ-VAVSID 60

Query: 110 TRTRGFHAATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRRRHPLAVD-RPLAD 168
            R            ++  V     +  +L++D DDE L++R++ETRRRHPL  D R LA+
Sbjct: 61  ARNLPSQLQRFPELLQE-VRDNHINCDVLYLDADDETLLKRFSETRRRHPLTTDTRSLAE 119

Query: 169 GIALERALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAIFVSSFGFRNGLP 228
            I  E  L+ P+ + A   LDT+ L   +LR  I+        P  A  V SFGF+ G+P
Sbjct: 120 AIGDESQLLGPIADLADLKLDTTSLNLYQLRDTIKLRLLNKPEPGTAFLVESFGFKRGMP 179

Query: 229 READLVFDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRVTALLALLVPRYE 288
            +ADLVFDVR L NP+++P LR+ +GL+P V  Y+AA PD   +   +   L   +PR+ 
Sbjct: 180 VDADLVFDVRCLPNPYWKPELRDHSGLEPEVREYLAAQPDVEEMYQDIVGYLNKWLPRFA 239

Query: 289 KEGKSYLTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRDL 333
              +SY+T+AIGCTGG HRSVY AER+ A L ++ +   +RHRDL
Sbjct: 240 ASNRSYVTVAIGCTGGHHRSVYLAERIGAALRDSLKNVQIRHRDL 284