Pairwise Alignments

Query, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

Subject, 321 a.a., RNase adapter RapZ from Bifidobacterium breve UCC2003

 Score =  188 bits (477), Expect = 2e-52
 Identities = 117/296 (39%), Positives = 159/296 (53%), Gaps = 11/296 (3%)

Query: 44  AEAPPSPAADRRVIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLFEAL-----TQGRW 98
           A+  P+PA    V+++TGMSGAGR+    ++ED+G+  VDNLP  L   L     T G  
Sbjct: 23  ADNQPNPADAFEVLLITGMSGAGRSRAADSVEDMGWYVVDNLPPKLLVPLVDMMTTSGSD 82

Query: 99  DQPRPLVLGIDTRTRGFH--AATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRR 156
                L   ID R+R +    A VL  ++ L    G   R+LF+D  ++VL++RY   RR
Sbjct: 83  SGVHKLAAVIDVRSRSYFDDLAAVLGHLDDL----GVKTRILFLDASNDVLIKRYESVRR 138

Query: 157 RHPLAVDRPLADGIALERALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAI 216
            HPL     L DGI  ER L+  LKERA   +DTS L   +L   +           +A+
Sbjct: 139 PHPLQHGNRLIDGILEERHLLENLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAV 198

Query: 217 FVSSFGFRNGLPREADLVFDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRV 276
            + SFGF+ G+P +AD V DVRFL NP + P LRE+TG D  VA YV +       +D  
Sbjct: 199 HIFSFGFKYGMPIDADFVADVRFLPNPFWVPSLRELTGADKPVADYVLSSKGAKEFLDSY 258

Query: 277 TALLALLVPRYEKEGKSYLTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRD 332
              +   +  Y +E K ++TIAIGCTGG+HRSV  +E LA  L   G    V  R+
Sbjct: 259 ERAIETAIEGYAQEDKHFVTIAIGCTGGQHRSVAMSEELARRLRAHGLNVTVSARE 314