Pairwise Alignments

Query, 564 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 449 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (301), Expect = 1e-31
 Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 16/316 (5%)

Query: 243 EIDETLFEMRLGVIEIFAFTLALTILLSFYIAGTIVRPLLRLAGAADRVRHGKAGRHEAI 302
           E+DE   +  +  +      L +  L S ++  +I RPL RL GA   +      +H ++
Sbjct: 141 ELDEWHRQSLMWPLSALGIALVVLTLFSLFVTLSITRPLSRLRGAVYDLGQTSYQQH-SL 199

Query: 303 PDFSNRRDELGDLSAALREMTEVLWARMDAIERFAADVAHEIKNPLTSLRSAVETVARID 362
              +NRRDE G L+     M   L + + +  +   DV+HE+++PL  LR A+    R +
Sbjct: 200 GQLANRRDEFGVLAKDFNRMGARLQSLIGSQRQLLRDVSHELRSPLARLRIALALAERAE 259

Query: 363 DPNQQKRLMAVIVDDVQRLNRLITDISDASRLDAELSRAEMESVEIRPMLEMLAEVHAAE 422
            P ++++L   +  +  RL  LI++I   +RLDAEL   E   V+I  +L+ L     ++
Sbjct: 260 -PAEREKLWPRLGRECDRLEALISEILALARLDAELRGPE--PVDIEALLQRLK----SD 312

Query: 423 AEQRGVTIKVMGDAGDALGIEGLEGRLVQVFRNLIGNAVSFSPPGGTITLRAWRTKGKVV 482
            +  GV   +  +  D L  +G    + +   NL+ NA+ F+P G +I L+A      + 
Sbjct: 313 TQLDGVDQNIRVEVQDNLQFKGWPDMIERALDNLLRNALRFNPSGQSIDLQATLVGDHIR 372

Query: 483 ITVADDGPGIPPGKEADIFKRFYSERPREEKFGTHSGLGLSISQQIVETHRGTIRAENRR 542
           ++V D GPG+       + + FY   P +   G   GLGL+I+++  E H GT+   N  
Sbjct: 373 LSVRDHGPGVADEHLTQLGEPFY-RAPGQTTPG--HGLGLAIAKRAAERHGGTLMLGNHP 429

Query: 543 DGEGKIVGAMFTVELP 558
           DG     G + T++LP
Sbjct: 430 DG-----GFIATLDLP 440