Pairwise Alignments

Query, 290 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  103 bits (256), Expect = 1e-26
 Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 12/283 (4%)

Query: 13  GAVIGLITALAALSITLVFGIARFPNAATGDVATAGAFAGLLG--------PVLGSGALP 64
           G  +G +  LAA+ + + FG+    N A G++   GA+   L         P L   +L 
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 65  IIL-VGMATSAAVSLLFYVVLFRALAKRSPVASLIASIGMAFFLRAVLTYFIGHDQRVYP 123
           I L +    + AV L     + R L  R P+ +L+A+ G++  L+  +    G   R   
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGR-PLETLLATWGISLILQQTVRTIFGPTNREVG 366

Query: 124 LP--LVRAVPFGPLRVQAADIQVIVWAGAALAVTFALIHLTPIGKRMRAVADNPDLARSS 181
            P  +  A   G L +    + +IV+A A  A    L+  TP+G +MRAV  N  +A S 
Sbjct: 367 NPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSM 426

Query: 182 GINANKVMVVMWVVAGLLAGLAGTLLGVKTVVSPEMGWDLLMPAFAATILGTIGNPLGAV 241
           GI    V  + + +   +AG+AG  L     VSP +G   ++ +F   + G +GN  G +
Sbjct: 427 GIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTL 486

Query: 242 LGGLLIGLAQELSTPLVGFTYKIGVGFLVLLLTLLIRPQGLFA 284
           +G   +G+  +   P  G      +  ++++L +  RP+GLFA
Sbjct: 487 VGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLFA 529