Pairwise Alignments

Query, 255 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  161 bits (408), Expect = 1e-44
 Identities = 98/250 (39%), Positives = 142/250 (56%), Gaps = 20/250 (8%)

Query: 6   LVIQDIYKAFGGATVLEGVTLSAAAGGLSGLIGPNGAGKSTLFSIVSGFQKADAGEIFFE 65
           LV   + K +    V++   L+  AG + GL+GPNGAGK+T F ++ G  +ADAG I  +
Sbjct: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61

Query: 66  GHDVTRLDVVDRVRLGMGRTFQVPREFGSLSVRENL---MAAAPDQSGESLLSVFLRPGA 122
           G D+T   +  R +LG+G   Q P  F  LSV +N+   +    D  G         PG 
Sbjct: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDG---------PG- 111

Query: 123 IRAQEAAIAEEADGWLDFLNLSAVADLRAASLSGGQRKLLELGRVLMLRPRMILLDEPFA 182
              QE  +A      L+ L ++ VAD   ASLSGG+R+  E+ R L  +PRM+LLDEPFA
Sbjct: 112 ---QEKELAS----LLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFA 164

Query: 183 GVNPVLIGEIAQKIRTLSARGIGFLIVEHNLASLSALVDHLFVIDRGTLLAEGHPAAVLA 242
           GV+P+ +GEI + +  L  RGIG LI +HN+     + D  +++  G +LA+G P A+L 
Sbjct: 165 GVDPISVGEIQRIVIHLKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLN 224

Query: 243 DPRVREAYMG 252
           +P VR  Y+G
Sbjct: 225 NPDVRRVYLG 234