Pairwise Alignments

Query, 260 a.a., Transcriptional Regulator, LuxR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 248 a.a., DNA-binding HTH domain-containing proteins from Sphingomonas koreensis DSMZ 15582

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 9/243 (3%)

Query: 9   LGSFLEALNGTSDSADLTTLLTGTFARLGFPHSC--YHVVRLEGAGARLPYVLHNYKDSW 66
           +G FL  L   +   DL   +    A LGF +    +HV      G  +   LHNY   W
Sbjct: 6   MGPFLRELEAATSPDDLALAMVEICAILGFEYFALTHHVDIPSATGTDIR--LHNYPARW 63

Query: 67  SEHYFREGFLEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGLHDGYSVP 126
           +++Y  +     DPV          F WS      +L+   RR+     + G+ DG++VP
Sbjct: 64  ADYYDAQALGVSDPVHRASHVTSRGFPWSRMHDMITLTPGDRRVLMLGAEQGIGDGFTVP 123

Query: 127 IRGSHGEFATVTVIPEQGGDAARRLIGEQKHLVHLLALYFDRHARSTVINARLSSRRRKT 186
                    + +        A R L      L  L  L+    AR  + + R        
Sbjct: 124 ANVPGETLGSCSF----ANGAGRPLPEAMLPLAQLAGLFAFEGARR-LWSTRKIDEAAAP 178

Query: 187 VLSPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKLGTYSKTHAVVKALTLG 246
           VL+ R+++ + WAA GK  WEI+ I G+S ++V  H+  A ++ G + +T   ++AL  G
Sbjct: 179 VLTDRQRDCILWAARGKGDWEISRILGVSEETVARHIKQACERYGVHKRTLVAIRALFDG 238

Query: 247 LVT 249
            +T
Sbjct: 239 TLT 241