Pairwise Alignments

Query, 260 a.a., Transcriptional Regulator, LuxR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 247 a.a., DNA-binding HTH domain-containing proteins from Sphingomonas koreensis DSMZ 15582

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 11/240 (4%)

Query: 12  FLEALNGTSDSADLTTLLTGTFARLGFPHSC--YHVVRLEGAGARLPYVLHNYKDSWSEH 69
           FL A+    D   L TLL     RLGF +    +H   L+   A +   LHNY ++W +H
Sbjct: 8   FLNAIALVGDFTMLATLLGEMTERLGFTYFALTHHTDILDAPDAMIR--LHNYPEAWVDH 65

Query: 70  YFREGFLEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGLHDGYSVPIRG 129
           + R      DPV          F W+       ++    R    AR  GL DG++VP   
Sbjct: 66  FDRHRLGLSDPVHRASHRTNAGFPWNRVSDLIEMTPGDHRHIDMARAHGLVDGFTVP-SN 124

Query: 130 SHGEFATVTVIPEQGGDAARRLIGEQKHLVHLLALY-FDRHARSTVINARLSSRRRKTVL 188
             GE AT +     G D  R L  +      L+ +  F+   R  +   R    R +  L
Sbjct: 125 IVGE-ATGSCSFAIGRD--RTLPVDTLQWAQLVGIASFEGARRIWLAGNRPPGPRPR--L 179

Query: 189 SPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKLGTYSKTHAVVKALTLGLV 248
           + R+++ L WAA GKT+WEI+ I GIS ++V  HL +A+ + G   +T  +++AL  G++
Sbjct: 180 TDRQRDCLIWAARGKTAWEISRILGISEETVVRHLKHARDRYGVEKQTSLLIRALFDGII 239