Pairwise Alignments

Query, 651 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 777 a.a., penicillin-binding protein 1B from Rhodanobacter denitrificans FW104-10B01

 Score =  267 bits (683), Expect = 1e-75
 Identities = 186/518 (35%), Positives = 261/518 (50%), Gaps = 31/518 (5%)

Query: 136 VRTSDVPRALVLAILATEDRRFFKHFGLDLVGIARASVVNLRAGRVVQGGSTLTQQVAKN 195
           VR +DVP  LV  + A EDR F  H G+DL  IARA+  NLRAG  VQGGSTLTQQ+ +N
Sbjct: 169 VRLADVPPLLVSGLQAVEDRDFNHHIGIDLSAIARAAFANLRAGHTVQGGSTLTQQLVRN 228

Query: 196 LFLTHDRTFKRKIQEVLLALWLEQTFTKDQILSLYLNRVYL----GAGTHGVDAAARRYF 251
           LFL+ D+   RKI E L++L LE  ++K +IL  Y+N V+L    G   HG  AA+  YF
Sbjct: 229 LFLSRDQNLTRKINEALMSLLLEAHYSKGRILEAYVNDVFLGQQGGQAVHGFAAASEFYF 288

Query: 252 DQPVGQINLYQAALLAGLPKAPSRLNPVTNPDGSRVRTLQVLQNMVEAKMI--TPALAKQ 309
            + +  +   + ALL G+ K PS  +P  +P  +  R   VLQ   E ++I  T   A Q
Sbjct: 289 GRRLEDLRPQEIALLVGMVKGPSYYDPRRSPQRALTRRNLVLQEFFETQLISATQLNAAQ 348

Query: 310 AAAL---ADGAIPGARRGGMGSYFADWILERVD---DFAGPRDRDLIVRTTLDPVQQRSA 363
           AA L    +G +P  R       F D + +++    D    R+ +L + TTLDP  Q   
Sbjct: 349 AAPLDIVKNGQLPHNRFPA----FMDLVRKQITADFDEQALREGNLSIFTTLDPAAQLYT 404

Query: 364 EAAVAGLLAEKGAAMKASQAALVAL-APDGAVTAMVGGRDHATSPFNRAAQARRQPGSAF 422
           E A+   L   G   +  QAA V   A  G+V A+VG +      FNRA  ARR  GS  
Sbjct: 405 EQAITSSLKGLGKRGEGVQAAAVVTDAHSGSVLAVVGSKTPGEQGFNRALDARRPIGSTI 464

Query: 423 KPFVFLAGL--EAGLTPSTMMDDAPITV-----NGWSPGNYKDKYKGRVSLTQAFAQSLN 475
           KPFV+L  L        +++MDD+P+++     + W+P N   +    + +  A A S N
Sbjct: 465 KPFVYLVALTQPGRWNLASLMDDSPVSLRQPDGSYWTPQNDDHRSHDPLIMVDALAHSWN 524

Query: 476 TVAVRVSETAGRGAVVKVAHRLGVIGSLSPLPSIALGVFEVSPLDLTAAYAPFANGGYAV 535
              + +    G   +       G IG ++P PS+ +G  +++PL LT  Y   A  G+A+
Sbjct: 525 LATIHLGLQVGLPRIQAFLKSFG-IGDINPSPSLLIGALDLAPLQLTQLYQYLAADGHAL 583

Query: 536 VPHGILSIADRDGGLLYERQ-DSGPRRVVAPELARSMDTMLGAVVSWGTGRAAG---LPD 591
               +  + D +G  +   Q   GP      E  R     +  V  +GT  A G   L  
Sbjct: 584 PLVAVRGVLDGNGRTIKRYQVQGGPGEY--QEAVRLTTWAMQQVAEYGTASALGNSALAS 641

Query: 592 RTARGKTGTSQGYRDAWFVGYAGKTLAGVWVGNDDGTP 629
             A GKTGTS   RD+WF G+ G+ LA  W+G DD  P
Sbjct: 642 LHAAGKTGTSNDMRDSWFAGFTGEHLAVFWMGRDDNKP 679