Pairwise Alignments

Query, 651 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (491), Expect = 2e-53
 Identities = 114/308 (37%), Positives = 188/308 (61%), Gaps = 14/308 (4%)

Query: 76  RLMLVGVIWMVIGLA---GVVVWFGHDLPDPVTSANVTRRPSVTLLAADGSQLASFGDIQ 132
           RL++  +I +++G+    G   +   DLPD  T  +V  +  + + + DG  +A FG+ +
Sbjct: 16  RLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKR 75

Query: 133 GDTVRTSDVPRALVLAILATEDRRFFKHFGLDLVGIARASVVNLRAGRVVQGGSTLTQQV 192
              ++  ++P+ L+ A++ATED R+++H+G D +GI RA+   L +G   QG ST+TQQ+
Sbjct: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135

Query: 193 AKNLFLTHDRTFKRKIQEVLLALWLEQTFTKDQILSLYLNRVYLGAGTHGVDAAARRYFD 252
           A+N FL++++   RK++E+ +A+ +EQ  +K +IL LYLN++YLG  ++GV AAA+ YF 
Sbjct: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFG 195

Query: 253 QPVGQINLYQAALLAGLPKAPSRLNPVTNPDGSRVRTLQVLQNMVEAKMITPALAKQAAA 312
           + V  + L + AL+AGLPKAPS +NP+ + + +  R   VLQ M++ K IT   A+  AA
Sbjct: 196 KEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITK--AEYDAA 253

Query: 313 LADGAIP---GARRGGMGSYFAD----WILERVDDFAGPRDRDLIVRTTLDPVQQRSA-E 364
            A+  +P   GA       Y A+    W++ER  + A      + V TT+D   QR+A +
Sbjct: 254 RAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAA-YTSGMNVYTTVDSKLQRAANQ 312

Query: 365 AAVAGLLA 372
           AA+  LLA
Sbjct: 313 AAINNLLA 320



 Score =  128 bits (322), Expect = 9e-34
 Identities = 102/316 (32%), Positives = 143/316 (45%), Gaps = 55/316 (17%)

Query: 358 VQQRSAEAAVAGLLAEKGAAMKASQAALVALAPD-GAVTAMVGGRDHATSPFNRAAQARR 416
           V+ R+ + A+    A K   +  +  A VA+ P+ GAVTA+VGG +   + FNRA Q+ R
Sbjct: 421 VRPRTQDGAIT---AWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVR 477

Query: 417 QPGSAFKPFVFLAGLEAGLTPSTMMDDAPITV------NGWSPGNYKDKYKGRVSLTQAF 470
           Q GS+ KPF++ A L  GLT +T+++DAPI          W P N    Y G   L    
Sbjct: 478 QVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGL 537

Query: 471 AQSLNTVAVRVSETAGRGAVVKVAHRLGVIGSLSPLP---SIALGVFEVSPLDLTAAYAP 527
           AQS N +AVRV    G     +   R G    L  LP   +IALG   ++P+ +   ++ 
Sbjct: 538 AQSKNVMAVRVLREVGLDETREYLTRFGF--KLDQLPRSETIALGAGSLTPVQMAQGFSV 595

Query: 528 FANGGYAVVPHGILSIADRDGGLLYERQDSGPRRVVAPELARSMDTMLGA---------V 578
           FAN GY V P  I  + +  G + +  +   P+ V   E +  +D              V
Sbjct: 596 FANNGYFVEPFYISRVENPFGNIEFSAE---PKVVCHRECSSELDEFAEQDAASPYAPKV 652

Query: 579 VS---------------WGTG-------------RAAGLPDRTARGKTGTSQGYRDAWFV 610
           +S               WG G             RA  L  R   GKTGT+   +DAW+ 
Sbjct: 653 ISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYN 712

Query: 611 GYAGKTLAGVWVGNDD 626
           GYA   +   WVG DD
Sbjct: 713 GYAPGIVGVAWVGFDD 728