Pairwise Alignments

Query, 651 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (723), Expect = 3e-80
 Identities = 191/517 (36%), Positives = 264/517 (51%), Gaps = 24/517 (4%)

Query: 136 VRTSDVPRALVLAILATEDRRFFKHFGLDLVGIARASVVNLRAGRVVQGGSTLTQQVAKN 195
           +R    P  LV A+L TEDR F++H G+  + I RA VVNL+AGR VQGGSTLTQQ+AKN
Sbjct: 183 LRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKN 242

Query: 196 LFLTHDRTFKRKIQEVLLALWLEQTFTKDQILSLYLNRVYLGA----GTHGVDAAARRYF 251
           +FL+ DRT  RK++E  +AL ++  ++KD+IL  YLN VYLG       HG   A+R YF
Sbjct: 243 IFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYF 302

Query: 252 DQPVGQINLYQAALLAGLPKAPSRLNPVTNPDGSRVRTLQVLQNMVEAKMITPALAKQAA 311
            QP+ ++ + Q ALL G+ K PS  NP+   + +R R   VL+ M+E  ++T    +QA 
Sbjct: 303 GQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAV 362

Query: 312 AL-ADGAIPGARRGGMGSYFADWILERVDDFAG--PRDRDLIVRTTLDPVQQRSAEAAVA 368
               D            +YF    +E  +        D  L V T+LDPV Q   E A+ 
Sbjct: 363 TRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIH 422

Query: 369 GLLAE--KGAAMKASQAALVALAPDGAVTAMVGGRDHATSPFNRAAQARRQPGSAFKPFV 426
             + +  K A      AA+      G + AMVGG+      FNR   A RQ GS  KP V
Sbjct: 423 DQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAV 482

Query: 427 FLAGL--EAGLTPSTMMDDAPITVNG-----WSPGNYKDKYKGRVSLTQAFAQSLNTVAV 479
           +L  L        +T ++D P+T+ G     W+P NY  +Y+G V L  A AQSLN   V
Sbjct: 483 YLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTV 542

Query: 480 RVSETAGRGAVVKVAHRLGV-IGSLSPLPSIALGVFEVSPLDLTAAYAPFANGGYAVVPH 538
            +    G   V     +LGV    + P+PS+ LG F ++P  +   Y    N G      
Sbjct: 543 ALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLS 602

Query: 539 GILSIADRDGGLLYERQDSGPR--RVVAPELARSMDTMLGAVVSWGTGR--AAGLPDRTA 594
            + S+ D +G +LYE   S PR  + V  + A      +   V  GTGR   A       
Sbjct: 603 ALRSVLDLEGNVLYE---SLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAAL 659

Query: 595 RGKTGTSQGYRDAWFVGYAGKTLAGVWVGNDDGTPMR 631
            GKTGT+   RD+WFVG  G+ +  +W+G DD  P +
Sbjct: 660 AGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK 696