Pairwise Alignments

Query, 651 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 625 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  357 bits (917), Expect = e-103
 Identities = 234/608 (38%), Positives = 330/608 (54%), Gaps = 27/608 (4%)

Query: 65  RPRRRWVWPLIRLMLVGVIWMVIGLAGVVVWFGHDLPDPVTSANVTRRPSVTLLAADGSQ 124
           RPR R  WPL RL+       +  + G+ + F  +LPD           +  +   +G  
Sbjct: 11  RPRSRRKWPL-RLVYGSSAIAIGAVLGLALSF-RNLPDVRLLRRYVPSQTTYIYDINGEL 68

Query: 125 LASFGD-IQGDTVRTSDVPRALVLAILATEDRRFFKHFGLDLVGIARASVVNLRAGRVVQ 183
           +A+  D    +TV  + +   L  ++LA ED  F+ H G++ +GI RA V N  +G VV+
Sbjct: 69  IAALHDEANRETVPLNQISPKLQQSVLAIEDSNFYDHPGINPIGIGRAIVANFSSGGVVE 128

Query: 184 GGSTLTQQVAKNLFLTHDRTFKRKIQEVLLALWLEQTFTKDQILSLYLNRVYLGAGTHGV 243
           GGSTLT Q+ KNLFLT DR F RK+ E +LAL LEQ  +KD+IL LYLN+VY G   +GV
Sbjct: 129 GGSTLTMQLVKNLFLTPDRNFGRKLSEAVLALRLEQVISKDRILELYLNQVYWGRNLYGV 188

Query: 244 DAAARRYFDQPVGQINLYQAALLAGLPKAPSRLNPVTNPD--------GSRVRTLQVLQN 295
           + A+R YF++    ++  +A+ LAGL  AP    P    D         ++ R   VLQ 
Sbjct: 189 EMASRSYFNKSAANLDWAEASFLAGLIAAPEFYTPFDERDRLSPQRLERAKERQRLVLQR 248

Query: 296 MVEAKMITPALAKQAAA--LADGAIPGARRGGMGSYFADWILERVDDFAGPR---DRDLI 350
           +VE   ++P+ A  AAA  L  G I  + R     Y +D +++ +    G        L 
Sbjct: 249 LVEIGQLSPSAASAAAAEPLKFGEI-SSFRPSSAPYVSDAVIQELAQQFGRSAVVQGGLR 307

Query: 351 VRTTLDPVQQRSAEAAV-AGLLAEKGAAMKASQAALVALAP-DGAVTAMVGGRDHATSPF 408
           V+TT+D   QR AE  +       + A ++A + ALVA+ P    + AMVGG D+ TS +
Sbjct: 308 VQTTIDLRMQRLAEKVIQENYQRNRRAGLRADEMALVAIDPRTHFIKAMVGGVDYRTSQY 367

Query: 409 NRAAQARRQPGSAFKPFVFLAGLEAG-LTPSTMMDDAPIT----VNGWSPGNYKDKYKGR 463
           NR  QARRQPGSAFKPFVF A L  G   P++ + D P+T       +SP NY   + G 
Sbjct: 368 NRVTQARRQPGSAFKPFVFYAALATGKYRPNSSIADTPVTYQLGAETYSPQNYDRSFAGN 427

Query: 464 VSLTQAFAQSLNTVAVRVSETAGRGAVVKVAHRLGVIGSLSPLPSIALGVFEVSPLDLTA 523
           +SLT A AQS N  AVR+ +T G   V+++  R+G+   + P+ S+ LG   V+PL+LT 
Sbjct: 428 MSLTSALAQSRNIPAVRLGQTVGLDRVIEICRRIGISSPMQPVVSLPLGAIGVTPLELTN 487

Query: 524 AYAPFANGGYAVVPHGILSIADRDGGLLYERQDSGPRRVVAPELARSMDTMLGAVVSWGT 583
           AYA  A+GG+   P  IL + D  G  L +     P+  +  +    ++ M+ AVV+ GT
Sbjct: 488 AYATLASGGWYAPPTLILQVRDSQGRRLLDHTPR-PQPELQSKAVAQLNQMMQAVVTSGT 546

Query: 584 GRAAGLPDRTARGKTGTSQGYRDAWFVGYAGKTLAGVWVGNDDGTPM-RDVTGGILPTQI 642
           GRAA   +R   GKTGT+   RD WFVGY     A VW+GNDD + +    TGG +   I
Sbjct: 547 GRAAQF-NRPVAGKTGTTSDERDIWFVGYTPDLAASVWLGNDDNSKIGGGATGGAIAAPI 605

Query: 643 WHAFMLNA 650
           W  FM  A
Sbjct: 606 WREFMQQA 613