Pairwise Alignments

Query, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 496 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  142 bits (359), Expect = 1e-38
 Identities = 83/180 (46%), Positives = 105/180 (58%), Gaps = 1/180 (0%)

Query: 181 YFYEGTRAKAAR-QLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDLDH 239
           YF    R + A  QL   A +D LTG  +RR   D     +    R    LSLL+LD+DH
Sbjct: 307 YFQSTARLRQAHDQLAQFANTDVLTGARSRRAFFDGLDAELARARRHGDGLSLLMLDIDH 366

Query: 240 FKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEK 299
           FK +ND +GH AGD VL   A +   ++R +DL  RIGGEEFA+ LP+TDL GAR VAEK
Sbjct: 367 FKRVNDVHGHPAGDVVLKQFAVICAALLRGHDLFGRIGGEEFAIALPNTDLEGARCVAEK 426

Query: 300 IRKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRVSAA 359
           IR+AI    +    G +S+TVSIG+A  D    +   L   AD  LY AK  GR++V AA
Sbjct: 427 IRQAIAQAPVATTAGEISITVSIGLACTDGGQHEADYLIVQADRALYLAKHGGRDQVYAA 486