Pairwise Alignments

Query, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (312), Expect = 3e-33
 Identities = 86/243 (35%), Positives = 114/243 (46%), Gaps = 5/243 (2%)

Query: 114 VFSWAVLFPVLPFFVLGQRLGLLVSIVFATTATVGVTILAVLDGAQGFSWIAPFNLAGAL 173
           V+ W+   P+L +     R   + S +F    +  +    +       SW    +L  A 
Sbjct: 96  VYIWSCFVPILFYIFTSARFAFVTSCLFLIIQS-NIIYWQLQQTGAALSWSVLLHLCFAY 154

Query: 174 AGCTVLAYFYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLL 233
            G  V+A+ YE  R K    L  LA  DPLTG  NR  L  +F      R      L LL
Sbjct: 155 IGIWVVAHVYEDNRRKIENSLLYLASRDPLTGAHNRLSLTTSFQH--FERFSDQTSLCLL 212

Query: 234 VLDLDHFKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGA 293
           V+DLD FKSIND++GH+ GD VL     +   ++  N+L  RIGGEEF + L D  L  A
Sbjct: 213 VIDLDFFKSINDQFGHDTGDKVLIETTRLFTQVVGDNNLY-RIGGEEFCVTLFDQSLEQA 271

Query: 294 REVAEKIRKAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGR 353
             V E +R  +           + VT+SIGV E          L   AD  LY+AKKAGR
Sbjct: 272 GRVCEHLRAIVSQHLFAFREKRVQVTISIGVCEYQAG-DQLNDLLKFADMELYRAKKAGR 330

Query: 354 NRV 356
           N+V
Sbjct: 331 NQV 333