Pairwise Alignments

Query, 242 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

Subject, 367 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 100 LTQDSES-AGTPLHVSLTAAPTDAVTVGGTVTPPSPRPSLHFASDQADLDDDAGPLLAEA 158
           +T D +  A TP +  + A   +  TV   VT      S+ FA++ A ++  +   + + 
Sbjct: 218 VTDDKDQCANTPSNHKVDA---NGCTVYREVTEKHELGSIRFANNSAVVNSASYGQIEKL 274

Query: 159 ARVLKQDPRLSLMVMGHTDDRHALDEALDLSARRAEAVVAALVEDHGVERGRLVPRGAGW 218
           A  + Q+PR ++++ GH  +    D  +DLS RRA AV   LV  +G+ + R+  +G G 
Sbjct: 275 ANYMNQNPRATVLIGGHASNVGNPDYNMDLSERRANAVAELLVSKYGISQDRVSAKGYGI 334

Query: 219 LAPVASNRTQAGRALNRRVD 238
             P+   ++      NRR++
Sbjct: 335 TQPLIEGKSAEANKANRRIE 354