Pairwise Alignments

Query, 336 a.a., Cobalamin biosynthesis protein CbiB (NCBI) from Rhodospirillum rubrum S1H

Subject, 303 a.a., putative cobalamin biosynthesis protein CobD from Phaeobacter inhibens DSM 17395

 Score =  239 bits (610), Expect = 6e-68
 Identities = 142/316 (44%), Positives = 192/316 (60%), Gaps = 19/316 (6%)

Query: 18  LVLLALVFDAYLGGMGPLFRLIPHPVVVMGGAIDALEQRLNRAERDDATRKRRGVFTVIV 77
           L++ AL+ DA  G    L+  +PHP V+MG A+  ++Q LN  ++    RK RGV  + +
Sbjct: 6   LLIPALLLDAIFGEPRWLWSRLPHPAVLMGRAVSLVDQTLNTGKQ----RKARGVLAITL 61

Query: 78  LVGAAIGLGVALQALASVLAVGWVLELLLAVALLAQRELHDHVAAVADGLETGGIDAGRE 137
           LV +A  LG  L         G ++++L+A  LLAQR L DHV AVADGL    +  GRE
Sbjct: 62  LVVSAGWLGWLLTLF------GPLVQILIAAILLAQRSLCDHVEAVADGLRLD-LTEGRE 114

Query: 138 AVSHIVGRDPALLDHAGVGRGALESLAENFSDGVVAPVFWFVLFGLPGLLAYKMINTMDS 197
           AV+ IV RD   +    + R A+ES AENFSDGVVAP FWF++ GLPGL+ YK+ NT DS
Sbjct: 115 AVAMIVSRDTTGMTTPQIARSAIESGAENFSDGVVAPAFWFLVGGLPGLMIYKITNTADS 174

Query: 198 MIGHRTPRLRAFGWAAARLDDGVNLIPARLSGLLL-IAAALTKPWADARAAFVVMLRDAG 256
           MIG++TPR + FGWA+ARLDD +NLIPARLS L++ I   + + W+D       + +DA 
Sbjct: 175 MIGYKTPRHKNFGWASARLDDALNLIPARLSALMIAIVGLVLRSWSD-------ITQDAR 227

Query: 257 KHRSPNAGWPEGAMAGALGLRLSGPRVYKGEAPRDEPYVGDGRAGVTPKDIRRGLALFRS 316
           +HRSPNAGWPE AMA AL + L+GPR Y G+          G    +   I R + L  +
Sbjct: 228 RHRSPNAGWPEAAMARALRIALAGPRSYDGKLQEFAWVNASGSKSASAHSIMRSIHLLWA 287

Query: 317 ACLIEGALIALLAIAL 332
           +     AL   +A+ L
Sbjct: 288 SWAFGLALTVAIAVLL 303