Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (257), Expect = 2e-26
 Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 22/395 (5%)

Query: 102 AQSGDRQGWRGAAKDITQSERADAEMDRQRRFQQTLLDAIPLPVFLKDREDRYQGCNLAF 161
           A+    +       ++ Q E+   E+  +    ++ +DA P  ++ ++ +  + GCN A 
Sbjct: 125 AEEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAM 184

Query: 162 ETASGRSRAEILGQRMEQVLRSENYDRHRAEEALVLREGRTRVWEAMEHDVSGRHKLISI 221
           E  +G+  +E++G     V R E        +  V        +E       GR     +
Sbjct: 185 EELTGKRESELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFEL 244

Query: 222 TASPYREPGDPTVRGLIGVVSDITRRQRAEDALRASVVELTASNRELQHFAEIAAHDLQE 281
              P+    D    GL+G   DIT R+R E++L         ++R+   F    +H+L+ 
Sbjct: 245 RKVPFYNK-DGRHLGLVGFGRDITERKRHEESLE-------KASRDKTTFISTISHELRT 296

Query: 282 PVRAVVSHCQLLERHLGDALDGPARDHMIFAITGARRMRDLIQDLLIYARAGRD--GQFH 339
           P+  +V   ++L   L   L G  R H+      A  + ++  D++   +  R     F 
Sbjct: 297 PLNGIVGLSRML---LDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFP 353

Query: 340 EVVDTADLAREV---VSALADEIAASGATIRIDPLPSVLG-RRRDLFDVMVNLFDNALKF 395
             ++  +   E+    + +A++        R+  LPS++      L  V+ NL  NA+KF
Sbjct: 354 AALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKF 413

Query: 396 RRPDVVPEVTLKAAETLDASGLWCFTLSDNGIGLDPVHGAQIFALFRRL-HGADRY--PG 452
            +   V  V   +AE           + D GIG+      +IFA++ ++  G D     G
Sbjct: 414 TKEGGV--VMTVSAECDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVG 471

Query: 453 TGVGLAICRRIVEQHGGTIFVESAPGVGTRFHFTL 487
           TG+GLA+ R++++  GG I V S  G G+ F  T+
Sbjct: 472 TGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTI 506