Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (276), Expect = 2e-28
 Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 15/383 (3%)

Query: 114 AKDITQSERADAEMDRQRRFQQTLLDAIPLPVFLKDREDRYQGCNLAFETASGRSRAEIL 173
           +++  Q   A+ ++  Q +  Q +LDA P P++    + ++   N  F    G    E++
Sbjct: 454 SQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVI 513

Query: 174 GQRMEQVLRSENYDRHRAEEALVLREGRTRVWEAMEHDVSGRHKLISITASPYREPGDPT 233
            +  +++  +E  +R  A   ++ ++  ++ +E    D +G  + + +  + + +  D  
Sbjct: 514 DKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADK- 572

Query: 234 VRGLIGVVSDITRRQRAEDALRASVVELTASNRELQHFAEIAAHDLQEPVRAVVSHCQLL 293
           V G++G++ D+T R+  ED LR +     A ++    F    +H+++ P+ A++    L 
Sbjct: 573 VNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLA 632

Query: 294 ERHLGDALDGPARDHMIFAITGARRMRDLIQDLLIYAR--AGR---DGQFHEVVDTADLA 348
              L   LD   R ++      A+ +  +I D+L +++  AG+   +     + D  D  
Sbjct: 633 ---LNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNV 689

Query: 349 REVVSALADEIAASGATIRIDP-LP-SVLGRRRDLFDVMVNLFDNALKFRRPDVVPEVTL 406
             VVS  A E       + IDP +P  ++G    L  VMVNL  NA+KF     +  ++ 
Sbjct: 690 TAVVSLKAQEKGIE-FLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIV-LSA 747

Query: 407 KAAETLDASGLWCFTLSDNGIGLDPVHGAQIFALFRRLHGA--DRYPGTGVGLAICRRIV 464
           + ++  +      F + D GIG+       +F  F +   +   +Y GTG+GL+I +++V
Sbjct: 748 RVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLV 807

Query: 465 EQHGGTIFVESAPGVGTRFHFTL 487
           E  GG I V S  G G+ F F++
Sbjct: 808 ELMGGQITVHSEEGKGSTFEFSV 830