Pairwise Alignments

Query, 210 a.a., Electron transport protein SCO1/SenC (NCBI) from Rhodospirillum rubrum S1H

Subject, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 5e-32
 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 2/185 (1%)

Query: 23  VLVIAIVAIGARFALMPTGTGRAAAIGGPFALVDDRGETLTN-DTFAGRFMLIYFGYTYC 81
           +LV+A     +  A + +    AA +  P  L  D  + +   D    R  ++YFG+T C
Sbjct: 8   ILVVAFTLGFSIKAYLDSQQKLAAQVTTPLTLSGDNQQAVAIFDQADPRIRIVYFGFTRC 67

Query: 82  PDVCPTSLGEMAAALDQLPEDQLARIAPIFISVDPERDTPALIGDYARAFHPLLIGLTGS 141
           PDVCPTSL  ++AAL+Q+ +   A++ P+FIS+DPERD   L   YA  FHP++ GL+GS
Sbjct: 68  PDVCPTSLAMLSAALNQVDDKTKAQLRPMFISLDPERDDAKLAAQYAHYFHPMIEGLSGS 127

Query: 142 PAQIATVTKAYKVYFKKVE-QEAGAPYLVDHSSVTYLMGPDGRFITHFSHGTPSDEMAAR 200
            A    + + Y V F+K E   +   Y +DHSS  Y + PDG  I    H      +   
Sbjct: 128 VATTNQIAQKYGVIFRKTELPNSELKYTLDHSSYFYFLQPDGTLINKVPHTQDPTPIVDA 187

Query: 201 LSKIL 205
           + K++
Sbjct: 188 IKKVI 192