Pairwise Alignments

Query, 278 a.a., Pseudouridylate synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 284 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  184 bits (468), Expect = 1e-51
 Identities = 109/254 (42%), Positives = 146/254 (57%), Gaps = 4/254 (1%)

Query: 3   RYRLTVEYDGRGYCGWQRQDNGP-TIQQSLEEAAFRLCGVATRVHGSGRTDSGVHALGQV 61
           R  L VEY G  Y GWQRQ +G  T+Q++LE A  ++      +H +GRTD+GVHA GQV
Sbjct: 18  RIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLHCAGRTDAGVHACGQV 77

Query: 62  AHLDLPRAYGAATVMKALNAHLRPQPIAVIDAAEVAEDFHARFSAEERSYRYRILN-RIA 120
            H D          +   N +L P  ++V  A  +   FHARF A  R YRY I N +I 
Sbjct: 78  VHFDTQVERSMKAWVMGANINL-PHDVSVSWAKVMPAHFHARFKAIARRYRYVIYNDQIR 136

Query: 121 PPTLDQGRVWWVARPMEAAIMDEAAQVLVGRHDFSSFRAAECQADSPVKTLSELRVTRVG 180
           P  L++  + W  RP++   M EAAQ LVG HDFS+FRA +CQA SP+K L  LRVTR G
Sbjct: 137 PAHLNE-EITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAKSPIKELHHLRVTRHG 195

Query: 181 DEIHVFARARSFLHHQVRNMVGTLALVGDGRWTADRLRAALEACDRSAAGPTAPPDGLYF 240
             I +  RA +FLHH VRN+ G L  +G G    + ++  L++  R + G TA P GLY 
Sbjct: 196 KMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRVRRSGGVTAHPFGLYL 255

Query: 241 LRVRFPGETAAPAK 254
           ++V +  E   P +
Sbjct: 256 VQVEYRDEFELPER 269