Pairwise Alignments

Query, 278 a.a., Pseudouridylate synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 3e-48
 Identities = 100/258 (38%), Positives = 140/258 (54%), Gaps = 2/258 (0%)

Query: 2   VRYRLTVEYDGRGYCGWQRQDNGPTIQQSLEEAAFRLCGVATRVHGSGRTDSGVHALGQV 61
           +R  L +EYDG  Y GWQRQ    ++Q++LE+A  ++      V  +GRTD+GVH  GQV
Sbjct: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60

Query: 62  AHLDLPRAYGAATVMKALNAHLRPQPIAVIDAAEVAEDFHARFSAEERSYRYRILNRIAP 121
            H D              NA+L P+ IAV  A  V ++FHARFSA  R YRY I N +  
Sbjct: 61  VHFDTTAERQMVAWTMGANANL-PKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYR 119

Query: 122 PTLDQGRVWWVARPMEAAIMDEAAQVLVGRHDFSSFRAAECQADSPVKTLSELRVTRVGD 181
           P +    V      ++   M +A Q L+G +DF+SFRA  CQ+ SP + +  L VTR G 
Sbjct: 120 PGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGR 179

Query: 182 EIHVFARARSFLHHQVRNMVGTLALVGDGRWTADRLRAALEACDRSAAGPTAPPDGLYFL 241
            + +  +A +F+HH VRN+ G+L  VG G    + ++  L   DR+ A  TA  +GLY +
Sbjct: 180 YVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLV 239

Query: 242 RVRFPGETAAP-AKAGPL 258
            V +P     P    GPL
Sbjct: 240 SVDYPAHFGLPEMPIGPL 257