Pairwise Alignments

Query, 705 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  309 bits (791), Expect = 3e-88
 Identities = 200/558 (35%), Positives = 291/558 (52%), Gaps = 20/558 (3%)

Query: 146 LALDSADLGVWECTIATNQWWFSEAALRILGCPPDAETSIETVMGAIHSDDLDGLRARWH 205
           LA++ A  G+W     + +    +    ILG   +        +  +H +D     AR++
Sbjct: 84  LAMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTHAWLTLVHPEDT----ARYN 139

Query: 206 AARTGRARD---RMEGEFRIQRGGGRLGWIACSARLVADDGKAVTRMLGTLRDITKTRLQ 262
            A +   +        E+R++   G   WIA     V D     T M G++ DIT+ +L 
Sbjct: 140 RAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAGSVTDITERKLH 199

Query: 263 REKLYHLAHFDPLTGLPNRHEMITRTQATLASGGAAGGAGAILLLDLDGFKEANDTLGQA 322
            E++ +LAH D LTGLPNR  +  R    L          A+L +DLD FK  ND+LG  
Sbjct: 200 EERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRAAVLFVDLDRFKNINDSLGHN 259

Query: 323 TGDALLKRIAHRLVSSLPADSLIGRVGGDEFLVVVPGVAEQWTATRIADGLYDVLTVPFV 382
            GD LL+ +A RL   L     I R GGDEF+V++  +     A +I   L + L  P+ 
Sbjct: 260 QGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQLPEQAGQIGAKLLETLASPYR 319

Query: 383 IGDRRIPLSGRIGIALAPRDGTSAQDLMTHAELALQETKTISGCVTRFFSPRLHDEARER 442
                  L+  IGIAL P DG  A  L+ +A+ A+ E K+  G   RF++ R+++  + R
Sbjct: 320 EDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSSGGNTVRFYTGRMNERLQSR 379

Query: 443 QDMGLELRRATDNGEFELFYQPQIRLSDRAVVGAEALLRWRHPTRGVMPPAAFLHVLKRG 502
             +   LRRA +  E +L+YQPQI L+   ++GAEALLRW    R ++PP  F+ V +  
Sbjct: 380 VSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLRWNDGGR-LIPPDQFIPVAEET 438

Query: 503 PLAGEVGEWVVAKACADAAGLLN--------AGSRIRMAVNLFSAQFKAGTVDATVRRSL 554
            L   +G WV+  A A AA              +  R+A+NL + QF  G +   V   L
Sbjct: 439 GLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIAINLSARQFWGGGIAEHVLLRL 498

Query: 555 LESGLPAELLELEITEKVTLDRDEGILTCLKGLRDLGCGVAFDDYGTGYASLSMLKRYPL 614
              GLP   +ELE+TE V L ++   L  L+ LR+ G G+A DD+GTGY+SLS L+  P+
Sbjct: 499 EREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLALDDFGTGYSSLSYLRLLPI 558

Query: 615 TRLKIDRAFVQHLAESPKDG---AIVRAVLSLGNTFGLSVTAEGIEEEEQEKLLLGQGCD 671
             LKID++F+  L E  +DG   AIVRA+L++ +T G  V AEG+E + Q +LL   GCD
Sbjct: 559 DTLKIDKSFIFPLDED-QDGEAAAIVRAILAMAHTLGHKVVAEGVERQTQLELLRTMGCD 617

Query: 672 EGQGYFFGRPMPLADFIQ 689
             QGY   RP+P   F+Q
Sbjct: 618 SFQGYLESRPLPPEAFLQ 635



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 16/91 (17%)

Query: 60  AWLNLVHPEEREAVLLLWRRALREG-----EEFEARYRLHRGLSGYRWALGQGRPLRGDD 114
           AWL LVHPE+       + RA+ E        F   YR+      YRW   +G  +R   
Sbjct: 125 AWLTLVHPEDTAR----YNRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDAR 180

Query: 115 GEVREWIGTVVDIHDHMEAERTIALSEERLR 145
           G      G+V DI +         L EER+R
Sbjct: 181 GVATLMAGSVTDITER-------KLHEERMR 204