Pairwise Alignments

Query, 595 a.a., 60 kDa inner membrane insertion protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 556 a.a., Preprotein translocase subunit YidC from Pseudomonas stutzeri RCH2

 Score =  274 bits (701), Expect = 6e-78
 Identities = 184/560 (32%), Positives = 279/560 (49%), Gaps = 50/560 (8%)

Query: 48  GQMAAPSSVQAPGQSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADI--SPRIG 105
           GQ A P+      QS    P +P  P A         P  A   +  AL A    S  I 
Sbjct: 28  GQAALPAET---AQSQPGVPTLPDSPSATSEGNADDVPAVAGQQQASALPATAPSSQLIR 84

Query: 106 IDTARLHGSIRLRGARIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPG 165
           + T  L  +I  RG  I +L L  +    D       L    G    Y A+ G +   P 
Sbjct: 85  VRTDVLDVAIDPRGGDIVELHLPQFPRRQDRPDVPFQLFERSGERT-YEAQSGLIGDGPD 143

Query: 166 VKV--PDADTLWQADRGALGVDAPVTLTWDNGEGLRFIRKIAIDH-DFMFSITQAVENTG 222
                P   +     + A G D  V     + +G+ +I++  ++  ++   +   ++N  
Sbjct: 144 QASGRPQYSSEKTEYQLAEGQDQLVVDLNYSADGVNYIKRFTLERGNYALKVNYLIDNQS 203

Query: 223 AGAVTLFPYGLVSR-------INTPALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVK 275
               T + +G + R        +T      Y+     L   D   ++V    + DD  ++
Sbjct: 204 EQPWTGYLFGQLKRDKSGDPSSSTATGTATYL--GAALWTKDEPYRKVSMGDM-DDKNLR 260

Query: 276 HTSTGGWMGITDKYWLTALV--TDQSMPVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGR 333
            T  GGW+     Y++TA +   + +  V  R     +D +  Y   F G A TV  G +
Sbjct: 261 ETVQGGWIAWLQHYFVTAWIPQAEDTNQVQTR-----KDSQGNYIIGFTGPAVTVAAGAQ 315

Query: 334 IETSNHLFSGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMG 393
            ET   L++G K    L+  +  L      L +D+G  +F+ +P F  ++ +H +LGN G
Sbjct: 316 GETGATLYAGPKSQDKLEELSPGLR-----LTVDYGILWFIAQPIFWLLENIHALLGNWG 370

Query: 394 LAILAFTVVLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKE 453
            +I+  T+++KL FFPL+  SYRSM++M+ + P+++ L+E+F DDR +++Q MM LYKKE
Sbjct: 371 WSIIVLTIIIKLAFFPLSAASYRSMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYKKE 430

Query: 454 QVNPLSGCLPIVIQIPVFFALYKVLFVSIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPW 513
           ++NPL GCLPI++Q+PVF ALY VL  S+EMR  P+  WI DL+  DP  +         
Sbjct: 431 KINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWITDLSIKDPFFIL-------- 482

Query: 514 DPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYW 573
                      P+IMGVTM++QQ+LNPTP DP QA++M  LPI+FTF    F AGLV+YW
Sbjct: 483 -----------PIIMGVTMFIQQQLNPTPPDPMQARVMKLLPIIFTFFFLWFPAGLVLYW 531

Query: 574 TWNNLLSITQQWVIMKRMGA 593
             NN+LSI QQW I +++ A
Sbjct: 532 VVNNVLSIAQQWYITRQIEA 551