Pairwise Alignments

Query, 362 a.a., Putative ammonia monooxygenase (NCBI) from Rhodospirillum rubrum S1H

Subject, 346 a.a., AbrB family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 1/149 (0%)

Query: 194 VFGQTLALAGIGATLGVFLRVPSGAMVVPMVAAAVLSSFGLLAIHLPPWLLALAYAALGW 253
           +F Q L +A + A  G  L +P   M +      VL     L IH PPWLL      LG 
Sbjct: 9   LFIQILIIAAVAAGTGTLLSIPLSEMFIASGLVIVLHKKRWLTIHTPPWLLLFVQVVLGI 68

Query: 254 TIGLGFTRAVLAHAARALPQILASIAALMAFCGGTAWLLTSLLGVDPVTAYLATSPGGLD 313
           ++G   + + L      LP I+  +  L      +   LT   G  P  + L   PG + 
Sbjct: 69  SVGATISLSELG-TTLTLPVIVGLVCCLTLQIISSYLWLTKKEGWTPFESLLGAVPGAMA 127

Query: 314 SVAIIAASSARVDLSFVMALQTARFIIVI 342
           ++ +I+ SS +     V +      I+ +
Sbjct: 128 AILVISESSEKPSAKVVYSHSVRLMILTL 156



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 12/161 (7%)

Query: 18  LQWLALGATSAAVGWGLHTTGLPAALLLGPMI--AAICCALAGTRIHLPRAPYLGAQAMI 75
           L +LAL   S  +G      G+PA  +L  ++  A+      G  + LP+   + A A++
Sbjct: 181 LIFLALALMSLLLGKASTLLGIPAPYMLAALLITASFNGFATGIDMQLPKWMVIFATALL 240

Query: 76  GCMIGGSISPGLIASFLDDWALFLAI----VLATVAASSLLGWMMSR-WGSLPGTTSVWG 130
           G +IG  I+   +   +      + +    +L  V  S +   ++ + W  L     +  
Sbjct: 241 GILIGSRIADTTLREAMAYSRAGVMVTMIGLLVAVGVSGVFSILIDKSWVVL-----LLS 295

Query: 131 SSPGAASAMVVMAEAFGADVRLVAFMQYLRVVCVASAAALI 171
             PG+  AM  +A   G +   V     LR++ + S  A++
Sbjct: 296 WVPGSVEAMTAVALLLGMEPAFVMINHALRLLLLYSLPAML 336