Pairwise Alignments

Query, 496 a.a., Cytochrome c oxidase cbb3-type, subunit I (NCBI) from Rhodospirillum rubrum S1H

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  628 bits (1619), Expect = 0.0
 Identities = 291/454 (64%), Positives = 356/454 (78%), Gaps = 7/454 (1%)

Query: 21  VIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNV 80
           V+++F +  +LWG+VG   G +IA QL +P LN D  W ++ RLRPLHT+AV+FAFG + 
Sbjct: 17  VVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSA 76

Query: 81  LLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVD 140
           L  TS YVVQRT +  L+GG  L    FWG+Q  IV AA+   LG T GKEYAE EW +D
Sbjct: 77  LFATSYYVVQRTCQTRLFGGP-LVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEWPID 135

Query: 141 LFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDS 200
           + +  VWV Y   F GTL+KR+  HIYVANWFF A IIT+A+LH+ N+MA+PV+ MG   
Sbjct: 136 IAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVS-MG--- 191

Query: 201 WVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFVPKQAQRPVYSYRLSIVHFW 260
             KSY  Y+G  DAM QWWYGHNAVGF LTAGFLG+MYYFVPKQA+RPVYSYRLSIVHFW
Sbjct: 192 --KSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFW 249

Query: 261 ALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDP 320
           ALI LYIWAGPHHLHYTALPDW Q++GMV S++L+ PSWGGMING+MTLSGAW KLR DP
Sbjct: 250 ALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDP 309

Query: 321 VLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYL 380
           +LRFL+VS+ FYGMSTFEGPMMSIK VN+LSHYTDWTIGHVHSGALGWVA VS G++Y+L
Sbjct: 310 ILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHL 369

Query: 381 VPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIE 440
           +P L+ +  +YS+ L++ HFW+AT+G VLYI +MW+SG+MQGLMWRA +  G L YSF+E
Sbjct: 370 IPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVE 429

Query: 441 SVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTI 474
           SV A +P+Y +R  GG +F+ G  +M YN Y+TI
Sbjct: 430 SVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTI 463