Pairwise Alignments

Query, 506 a.a., 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) from Rhodospirillum rubrum S1H

Subject, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (753), Expect = 4e-84
 Identities = 161/406 (39%), Positives = 232/406 (57%), Gaps = 26/406 (6%)

Query: 38  GNSLYESYQKVHPRRISGTYRSIKWWMMGLLLTIFWVGPWLRW-DRGPSVSDQAIFIDMP 96
           G   +    +++ R   GTY+ ++ +    LL +F + PW+ + DR      QAI +D+ 
Sbjct: 25  GGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVPWISYGDR------QAILLDIG 78

Query: 97  GRRAYFFFIEIWPQEVYYLTGLLIIAAVGLFFATALLGRVWCGFACFQTVFTDLFVAVER 156
            ++  FF   ++PQ++  L  L +IAA GLFF T  LGRVWCG+ C QTV+T +++  E 
Sbjct: 79  NQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEE 138

Query: 157 LLEGDRNSRIKRDSSPMTVDTLMRKTLKTVIWVLISLAVGIGFILYFYPAPWPAIVDIVT 216
            LEG+ N R K+D+SPMT + + RKTLK + W+ I+L  G  F+ YF P     ++D  T
Sbjct: 139 KLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIR-ALVIDFFT 197

Query: 217 FNAGA-----AAYGTLAVVGGGCLIMAGYAREQVCMYMCPYARFQSAMVDEDSMIVTYEK 271
            +A         +  L   G      AG+ R  +C++MCPYARFQSAM D+D+ IV Y+ 
Sbjct: 198 LSAAFWPVFWVLFFALCTYGN-----AGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDV 252

Query: 272 WRGEPRGKYSRDADFSQ--RGDCVDCGLCVQVCPTGVDIREGTQLGCIGCGLCVDACNSV 329
            RGE RG  SR AD      GDC+DC LCVQVCPTG+DIR+G Q  CI CG C+DAC++ 
Sbjct: 253 ARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACDNT 312

Query: 330 MTRFGLPPNLIAYDSITNQNARAEGSSRRIRLIRPRTLVYSALLLVVIGAMAASLATRSR 389
           M R G    LI+Y            S +  +++RP+ L Y A+ LV+IG   A +A    
Sbjct: 313 MERMGYAKGLISY------TTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDP 366

Query: 390 LDISVLHERSPLFVTMSDGSVRNGYTFKVLNMERIDNAFSLTTTGI 435
             ++VL +R+ LF T S G + N Y  KV+N  +    + L+  G+
Sbjct: 367 AGLTVLRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGL 412