Pairwise Alignments

Query, 169 a.a., integral membrane protein linked to a cation pump-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 156 a.a., protein CcoH from Phaeobacter inhibens DSM 17395

 Score = 48.5 bits (114), Expect = 5e-11
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 16/143 (11%)

Query: 10  GWWYPYIFVGAFGVVLAVNLTLLYFATSTFNGLVTTTAFEEGVAYNREIAAARAQETLGW 69
           GW    +F GAF V++ VN+ L   A  TF GL    ++    +++   A   AQ+ LGW
Sbjct: 12  GWHMLMVFGGAFSVIIGVNIALAVNAVRTFPGLEVKNSYVASQSFD---ARRDAQQALGW 68

Query: 70  TAKAALEPRAGGVEGSWPADLVVSLTSAENQPLLRDLAVTAQIRRPTQAGFDQALTLTAG 129
           +  A+    A G +      + + +T A+  P +   A+ A + R T    DQ  T    
Sbjct: 69  SVYAS----AVGDQ------VKLEVTDADGAP-VEVAALRATLGRATHVKDDQ--TPDFR 115

Query: 130 TDGRWHAPLVLPFAGQWEVRVVA 152
            DG  +       AG W +R+VA
Sbjct: 116 FDGTAYVAPAELSAGNWNIRMVA 138