Pairwise Alignments

Query, 314 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 7e-35
 Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 9/302 (2%)

Query: 8   LPWLALGLALIVAPFFVYP---VFLMKVLCFALFACAFNLLLGYVGLLSFGHAAFFGFAA 64
           L  LA+ L L    + ++P     L ++   AL   + +L+ GY G+ + GHAA FG  A
Sbjct: 22  LAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81

Query: 65  YVSAHALKVWEL-GPLQAVALGTLTAGVLGLGFGWLAIRRQGIYFAMVTLALAQMIY-FL 122
           Y +  A   + +  PL  +A G L   + GL  G + +R  G+   ++++AL  + + F 
Sbjct: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141

Query: 123 CLQAAFTHGEDGIQAVPRPPVFGLIDVSDPGRL-YWLVLALTVLGFLVIARAIHSPFGQV 181
              +++T G DG+  +   P+ GL      GR  Y   + L  + F+++   + SPFG +
Sbjct: 142 NKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGML 201

Query: 182 LTAIRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAIKVMVFQLASLTDVHWHMSGEV 241
              IRE+  R  ++G       L  +V+S A+AG  GA+  +  Q+  L  + + +S E 
Sbjct: 202 CRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAES 261

Query: 242 VLMTLIGGVGTLAGPLVGAAVVVGIQNVFASFGA--WVTIIQGVIFVACVLLFRRGIMGE 299
           ++M ++GG G+L G L G  V +  +++ ++     W+T++ G + +A VL   +G+ G 
Sbjct: 262 LVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMV-GALLIAVVLFAPKGLYGT 320

Query: 300 IA 301
           +A
Sbjct: 321 VA 322