Pairwise Alignments

Query, 314 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  118 bits (296), Expect = 2e-31
 Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 12/296 (4%)

Query: 11  LALGLALIVAPFFVYPV---FLMKVLCFALFACAFNLLLGYVGLLSFGHAAFFGFAAYVS 67
           LA+ +   V P  V       ++  L + +     N+++G  G L  G+ AF+   AY  
Sbjct: 94  LAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYAY 153

Query: 68  AHALKVWELGPLQAVALGTLTAGVLGLGFGWLAIRRQGIYFAMVTLALAQMIYFLCLQ-A 126
           A     + LG    + +G   A V G+  G+  +R +G Y A+VTL   +++  +     
Sbjct: 154 ALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLENWG 213

Query: 127 AFTHGEDGIQAVPRPPVFGL-IDVSDPGR-LYWLVLALTVLGFLVIARAIHSPFGQVLTA 184
           + T G  GI  + RP +FG+ + VS+    +Y+L+LA  +     + R   S  G+   A
Sbjct: 214 SVTRGPSGISKIARPGLFGMELSVSEATTYIYYLILAAVIFTIFAVGRLKDSRIGRAWQA 273

Query: 185 IRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAI---KVMVFQLASLTDVHWHMSGEV 241
           +RE+E    ++G D+   KL AF L A  AGFAG I   K      AS T +    S  +
Sbjct: 274 LREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFLE---SAMI 330

Query: 242 VLMTLIGGVGTLAGPLVGAAVVVGIQNVFASFGAWVTIIQGVIFVACVLLFRRGIM 297
           + M ++GG+G+  G ++GA V++ +     +F  +  +I G   V  ++   +G++
Sbjct: 331 LAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEYRMLIFGAAMVLMMVFRPQGLV 386