Pairwise Alignments

Query, 662 a.a., Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 550 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 26/272 (9%)

Query: 68  RQVLALLILALLPGALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAITGAEQVGK 127
           R  + + ++ LL   ++  ++  +S +  +E+    L + A +   +    ++   +   
Sbjct: 12  RFAIVVALVVLLLSCIFGTVIGESSISRLKEQTGLQLSEYAYSMIDRLDRDMSNRSRALT 71

Query: 128 ALALLPIL--TADPEICRESIDRIRRGFPAYQSIFVVDTGGGVICSAIRPGVDMPASVAE 185
            L+ L  L  TA+P   R  +D + + FP Y  I + DT G V+ S    GV   A +++
Sbjct: 72  VLSKLEALRNTANPGEARALLDHLSQQFPNYSWIGLTDTHGKVVAST--NGVLAGADISQ 129

Query: 186 RPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLE--GGAMP 243
           RP F         A A E + +     A+L+A  +P P G     V +   ++   G + 
Sbjct: 130 RPVF---------ANAREKTFIGDVHEAVLLAKLLPNPSGEAMKFVDISMPIKDVAGNLT 180

Query: 244 GK-------RFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPG 296
           G         + A+ G + L D   K LPG E L +  D  +L G +    +PA      
Sbjct: 181 GVLATHLSWEWAAEVGRS-LFDPLQKRLPGLEFLVISKDGTILLGPKDMIGKPA---GVT 236

Query: 297 RDGQPRSYALVPLPRGSVNLLFARPEASAFDW 328
            DG+ +S+++   P G++ L  A       D+
Sbjct: 237 LDGRGQSWSVERWPDGNLYLAGAAQSIGVDDY 268