Pairwise Alignments

Query, 278 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 188 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 109 FARSLTDDRALADDLAQEAATRALANRDSYHAGTNFRAWIFTIVRNCFYSEHRRKWRRME 168
           +A  L  DR++A+DL QE   RA  + DS       +AW+ TI+R     E+ R++ R +
Sbjct: 41  YAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLITILRR----ENARRFERKQ 96

Query: 169 KGNEDAMIRA-GAPETQESGLRMEDFKRGFTLLSEEQREALVLVGACGFDYQQAAEIAGC 227
               D       A  + +   + E  +R    L  E RE L L    GF  ++ A+I   
Sbjct: 97  FDLVDIDDHDYEAKYSDDEHHQNEWLQRQILKLDVEYRELLFLQVVGGFSGEEIADILSL 156

Query: 228 AVGTMKSRVSRARAELRTMLD 248
              T+ +R+ RAR +L+ M+D
Sbjct: 157 NKNTVMTRLFRARNQLKEMMD 177