Pairwise Alignments

Query, 358 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 1e-50
 Identities = 123/330 (37%), Positives = 175/330 (53%), Gaps = 21/330 (6%)

Query: 34  LTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDEVVVMAIRLPRILGALLV 93
           LTL  F  G Y +  G +   ++      L ++  L  T    +V+  IRLPR L  LLV
Sbjct: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQL--TNAIHLVIHDIRLPRTLLCLLV 71

Query: 94  GAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLL---------GLGGPAIQGL 144
           GA LA  G   QGLFRNPL  P ++G ++GA   AA  ++L          +    +   
Sbjct: 72  GAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPIA 131

Query: 145 AFLGGLAAVGLTCLIAKGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLADPDNTLPAI 204
           AF+GG  A+    +   G    G    +M+L G+ +  +  A IG +  LA  D  L  +
Sbjct: 132 AFIGG--ALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLAS-DQMLRDL 188

Query: 205 TFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR---LNALAFGDDEARALGIDVGRV 261
           T W MGS++  T   I L +  +   + L     WR   LNAL  G+ EAR LG+ V ++
Sbjct: 189 TLWSMGSVAGATTSSILLCSVTL---IMLFAYFHWRSMALNALLLGEAEARHLGVPVQKL 245

Query: 262 RLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAFLLGVD 321
           +   I+ + +    AV+ AG+IG VGLVVPH+ RML+GP+H  L+P   LLG   L   D
Sbjct: 246 KREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLAD 305

Query: 322 DLAR-SLGPTEIPLGILTALIGAPLFLALL 350
            +AR ++ P E+P+GI+TAL+GAP FL LL
Sbjct: 306 MVARVAVAPAELPIGIVTALVGAPFFLYLL 335