Pairwise Alignments

Query, 778 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (492), Expect = 3e-53
 Identities = 132/402 (32%), Positives = 214/402 (53%), Gaps = 20/402 (4%)

Query: 381 LDDRRIFTGLVRDISARKEADRQLRENEERYALAIAGTHEAIVDWDIDSDTITYSDRITA 440
           LDD  +   L ++   ++ A+R++ E  +     +  T   +     D   +T + +   
Sbjct: 444 LDDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLD 503

Query: 441 IVGLDPKD-LDRSASWIALIHPDHRKDYLTRMDALLRGESSFFSCDFRLAGRAGAEERWL 499
           ++GL   + +D+    I    P    +       +L  + S  + +  L    G +   L
Sbjct: 504 LMGLYNNEVIDKEPQEI---FPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREML 560

Query: 500 RHRATALRRPDGQIYRLSGAVG---DITDSRRGEDRLREAKEAAEFANRAKSEFLTNMSH 556
            + A+   R D    +++G VG   D+T+ +  ED LR+AKEAA+  ++AK +FL NMSH
Sbjct: 561 VYEASFSDRAD----KVNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSH 616

Query: 557 ELRTPLNAIIGFSEVLHSEMFGPLGATQYLDYAASIRDSGRHLLDVINDILDVSRIEAGR 616
           E+RTP+NAI+G +   H  +  PL  TQ   Y   I +S ++LL +INDILD S++EAG+
Sbjct: 617 EIRTPMNAILGMA---HLALNTPLDTTQ-RKYVTRINESAKNLLGIINDILDFSKMEAGK 672

Query: 617 ATLFPEPLDFAEIVASVHRLVNQRAEAAGVRLKITLDPALP-PLLGEARRLKQVLINLLG 675
             +     +  +++ +V  +V+ +A+  G+   + +DP +P  L+G+  RL QV++NL G
Sbjct: 673 LNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCG 732

Query: 676 NAIKFTPAGGEIALSARGDEDKGQMV---IEVSDSGIGMAPEDIPLALEPFRQIDGQLAR 732
           NA+KFT + GEI LSAR  +   Q V     V D+GIG+A + +    + F Q D  + R
Sbjct: 733 NAVKFT-SQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITR 791

Query: 733 RYEGTGLGLPLSKAFVELHGGTLRVDSTPGAGTRITVRLPAG 774
           +Y GTGLGL +SK  VEL GG + V S  G G+     +  G
Sbjct: 792 QYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCG 833