Pairwise Alignments

Query, 367 a.a., DNA methylase N-4/N-6 (NCBI) from Rhodospirillum rubrum S1H

Subject, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 7e-17
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 36/235 (15%)

Query: 8   NRIYQGDSIEVMRSLPSASIDMIFADPPYNMMLG----GELLRPDNSRVDGVDDEWDRFE 63
           ++IYQ D+++ +++L + S+D+   DPPY  +      G   R   S+     ++W    
Sbjct: 15  SKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESKSSS--NQWFSVF 72

Query: 64  SQRAYAEFTRSWLREARRLLKDNGTIWVIGSYHNIYRVGAELQDLGFWTLNDVVWRKANP 123
               + E      RE  R+LK     ++      ++      + +GF     +VW K   
Sbjct: 73  PNTRFEEL----FREVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDK--- 125

Query: 124 MPNFKGTRFTNAHETLLWCAKSAEARYTFNYEAMKSLNEGLQMRSDWTLPLCNGKERLKA 183
                             CA      Y   YE +    +G +  +D ++P     + L+ 
Sbjct: 126 ------------------CAIGMGYHYRARYEFILFFEKGKRKLNDLSVP-----DVLEY 162

Query: 184 EDGKKVHPTQKPESLLYRVILSSTHPGDIILDPFFGTGTTGAVAKLLGRQWIGLE 238
           +   K +PT+KP  LL  +I  S+   +I+ D FFG+G+T   A  L R++IG +
Sbjct: 163 KRVWKGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217