Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 374 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (584), Expect = 9e-65
 Identities = 134/316 (42%), Positives = 182/316 (57%), Gaps = 14/316 (4%)

Query: 4   LSLDGVSRQF-GARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL 62
           +S  GV + + G    V  ++L +  G FL LLGPSG GKTT L ++AGF+ P  G I L
Sbjct: 15  VSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILL 74

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
               + +    VPP +R +GMVFQ+YAL+PHMTVAEN+A+ L +RG+ +++ +  V+R L
Sbjct: 75  AGRSINN----VPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKSDVSDRVKRVL 130

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
             V L +   R PA LSGGQ+QRVALAR L   P ++L+DEPL  LD  LRE MQ E + 
Sbjct: 131 SMVQLDSFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKH 190

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGM 242
            H + G T+VYVTHDQ EAL+++D+VAV   G +QQ+A P  LY  P    VA F+G   
Sbjct: 191 LHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNTFVANFIGENN 250

Query: 243 VLPAHLGRATAGGGAVAATLFGQAISVDSPA----HPAGPARLCLRSEDLSLTG--PDTP 296
            L    GR  +  G       G+   V++ A     P  P  L +R E +SL G      
Sbjct: 251 RLN---GRLHSQTGDRCLVELGRGEKVEALAVNVGKPGEPVTLSIRPERVSLNGVSEQCV 307

Query: 297 EGLGCTVCDTVFHGDH 312
                 V + ++ GDH
Sbjct: 308 NRFSGRVAEFIYLGDH 323