Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., sucrose ABC transporter, ATPase component (from data) from Pseudomonas fluorescens FW300-N1B4

 Score =  228 bits (581), Expect = 2e-64
 Identities = 139/308 (45%), Positives = 185/308 (60%), Gaps = 11/308 (3%)

Query: 3   RLSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL 62
           +L LD V++Q G    +  VSL +  G F+  +GPSGCGK+TLLRLIAG D   GG + +
Sbjct: 3   KLKLDNVNKQLGGMRILRDVSLEIAAGEFVVFVGPSGCGKSTLLRLIAGLDSICGGDLLI 62

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
            DG   +D   + P  RGVGMVFQSYAL+PHM+V +N+++ LK+    +      V +  
Sbjct: 63  -DGRRVND---LEPRERGVGMVFQSYALYPHMSVYDNISFGLKLAKTDKTSLRERVLKTA 118

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
             + L  L  R P  LSGGQRQRVA+ R +A  P ILL DEPL+NLDA LR  M+ E   
Sbjct: 119 QILQLDKLLQRKPKELSGGQRQRVAMGRAMAREPDILLFDEPLSNLDASLRVQMRNEIAR 178

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVG--R 240
            H + G+TM+YVTHDQ EA++LADK+ V++GG ++QV +P ELY RPA+  VA F+G  R
Sbjct: 179 LHDRLGSTMIYVTHDQVEAMTLADKIVVLNGGRVEQVGSPRELYERPASRFVAGFLGSPR 238

Query: 241 GMVLPAHLGRATAGGGAVAATLFGQAISV--DSPAHPAG-PARLCLRSEDLSLTGPDTPE 297
              L A L   T G  ++  TL     S+  DS    AG P  L +R E +SL   D   
Sbjct: 239 MNFLSARL--QTPGETSLVDTLVWGITSLPFDSSNLAAGTPLSLGIRPEHVSLKAADGTA 296

Query: 298 GLGCTVCD 305
           G+  T  +
Sbjct: 297 GVVVTAVE 304