Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 369 a.a., spermidine/putrescine ABC transporter ATP-binding subunit from Pseudomonas stutzeri RCH2

 Score =  233 bits (593), Expect = 8e-66
 Identities = 135/319 (42%), Positives = 187/319 (58%), Gaps = 14/319 (4%)

Query: 4   LSLDGVSRQFGARTAVDR-VSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL 62
           +S  G+ + +   + + R ++L +  G FL LLGPSG GKTT L ++AGF+ P  G I L
Sbjct: 11  VSFRGIQKSYDGESLIVRDLNLDIRRGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILL 70

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
            DG   ++   VPP +R +GMVFQ+YAL+PHMTV+EN+A+ L +RG+A+ +    V+R L
Sbjct: 71  -DGRAINN---VPPHKRDMGMVFQNYALFPHMTVSENLAFPLSVRGMAKPDIKERVKRAL 126

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
             V L     R PA LSGGQ+QRVALAR L   P ++L+DEPL  LD  LRE MQ E + 
Sbjct: 127 AMVQLEGFRNRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREQMQMEIKH 186

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGM 242
            H + G T+VYVTHDQ EAL+++D+VAV   G +QQ+  P  LY +P    VA F+G   
Sbjct: 187 LHERLGVTVVYVTHDQGEALTMSDRVAVFHQGQIQQIEDPRTLYEKPVNTFVANFLGENN 246

Query: 243 VLPAHLGRATAGGGAVAATLFGQAISVDSPAHPAG----PARLCLRSEDLSLTG--PDTP 296
            LPAHL       G       G+  +V++ A   G    P  L +R E + L G   + P
Sbjct: 247 RLPAHL---LDRRGDSCTVKLGRGETVEALAVNVGAAGTPVSLSIRPERVLLNGASANCP 303

Query: 297 EGLGCTVCDTVFHGDHFAL 315
                 V + ++ GDH  +
Sbjct: 304 NRFTGRVAEFIYLGDHIRI 322