Pairwise Alignments

Query, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 110/503 (21%), Positives = 194/503 (38%), Gaps = 68/503 (13%)

Query: 110 VAQTMELAADRSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGV 169
           +A++ ++A D   + F +R   +WSDG+  TA+DV +SF +LK K +         VT V
Sbjct: 79  LAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSV 138

Query: 170 EVLDAKRVKFTFSPGENRELPSIVGQLPVLPKHYWA-TRDFAETTLDQPVSAGPYR-IAS 227
           E +D  +V+F  S   N  +P  +  +P++ +H W   +D    T + PV  GP+  I +
Sbjct: 139 EKVDEYKVRFRLSEA-NSNVPYEISLIPIVAEHVWKDVKDPTTFTNENPVGTGPFTVIDT 197

Query: 228 FEPGRQITYERVKDYW------AEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDF 281
           F P   I   R  +YW       + L V +  NN   +     + V   L+   +   D 
Sbjct: 198 FTPQLYIQC-RNPNYWDAANLEVDCLRVPQIANNDQLLG----KIVNSELDWTSSFVPDI 252

Query: 282 NSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYG 341
           +  ++A N    Y +PA      +   V  K PD         ++    +   R A +  
Sbjct: 253 DRTYAAANPNHHYWYPAAGTQAFM---VNFKNPD-------PAKKEALDNVDFRRAFSMA 302

Query: 342 FDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPP 401
            D +      FYG  T       N   + +G                     F       
Sbjct: 303 LDRQTIIDIAFYGSGT------VNDFASGLGY-------------------AFEAWSDEA 337

Query: 402 VTDEAKGGLRANLKKALDLMKEAGW-TVNAAGKMVNAAGQPFTFEILLRQ----ADVERM 456
              + KG    +++ +  L+ +AG+  VN  G +   +G+  +FE+L++      D    
Sbjct: 338 THKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGK--SFELLIQSPNGWTDFNNT 395

Query: 457 VLPMVKNFERLGITATVRTVDTPQFISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAA 516
           V   V+  + +GI A  RT +   +   +    +D+    +     P       ++S   
Sbjct: 396 VQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQ 455

Query: 517 DIPGTSNLA--GLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQWSFPWIPHYYGAF- 573
              G    A        +D L++S      + + +A    + +++  +   IP   GA+ 
Sbjct: 456 SGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWM 515

Query: 574 -----ERIAYW----NVFGRPAV 587
                 R   W    N  GRP+V
Sbjct: 516 YQYNTTRFTGWWSEENPKGRPSV 538