Pairwise Alignments

Query, 422 a.a., Type III effector Hrp-dependent outers (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 116/416 (27%), Positives = 159/416 (38%), Gaps = 99/416 (23%)

Query: 3   LLGCIADDFTGATDLAAMLVGNGMRTVLMLGRPKA-ATESPKADAVVVALKSRTTPAAQA 61
           +L  +ADD TGA D AA   G G+RT + L      A  +   D +VV +KSR   A +A
Sbjct: 1   MLVILADDLTGALDSAAPFAGRGLRTEVALALDSVDAALADAPDILVVNVKSREVSADEA 60

Query: 62  VSDSLDALTWLRAAGARQIVFKYCSTFDSTAQGNIGPVADALAEALETDFALVCPAFPAN 121
              + D L  +  +     +FK     DS  +GNI    DA   A     A+V PA P  
Sbjct: 61  RKATSDVLKHIPESAR---IFK---KVDSRLKGNIEAELDATPFAR----AVVAPAIPDF 110

Query: 122 GRTVYQGHLFVGDHLLNESGMRDHPLTPMRDASVVRLLAAQTPHRVGLIALPVVE----- 176
           GR V  GH                          VR    + P       +PV E     
Sbjct: 111 GRIVVDGH--------------------------VRGFGVEAP-------IPVAERFGRH 137

Query: 177 AGVPAIDEALRALRATGVRYGVIDALTDDHLRTIGAAAAGHRLITGGSGVAMGLPENFRR 236
           AG   I + +              + TD       A AAG  L+ G  G+A  L      
Sbjct: 138 AGRTLIPDTM--------------SRTDMLAALASAEAAGCDLMIGARGLADALAHLMTD 183

Query: 237 QGLLPFRDDSASLPKVDGGAAVLVGSCSQATRQQVAQARPHLPTLILDPLATPEAGALMA 296
              LP       +P       ++VGS    T +QV   R +  T  +     P AG    
Sbjct: 184 SETLPL------IPLPRQPILIVVGSRDLITVEQVDVLRENHSTEYV-----PAAG---- 228

Query: 297 IARAWIDAQPAGAPLMIVGSAAPEAVAALQKRLGAGPAGALIETVLAGLAEDLVER---G 353
             R    + PA   + I+   A E V  L      GPA      V A LA+ +V     G
Sbjct: 229 -GRVQQPSAPATGTVTII--QATEGVTPL------GPA-----EVSANLADSVVPAFTGG 274

Query: 354 IRSLVVAGGETSGAVVSRLGITSLRVGAEIAPGVPWTLADHPAGPLRLALKSGNFG 409
             +L++ GG T+ AV+ R+G++  R+  E  PG+    AD       +  KSG FG
Sbjct: 275 AATLLLTGGATAEAVLERMGVSRFRLLGECMPGIALAFAD----GRYIITKSGGFG 326