Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1282 a.a., diguanylate phosphodiesterase from Pseudomonas fluorescens FW300-N2E3

 Score =  482 bits (1241), Expect = e-140
 Identities = 281/738 (38%), Positives = 411/738 (55%), Gaps = 30/738 (4%)

Query: 118  RHISGSERVYSLRFSPLDNGPHPL---LVVITRDMTAQVAAENALRAAEGKYRAIFENAV 174
            RH  G  R + +R   L    H     ++ + +D+T Q+ A  +LR +E +YR + E+  
Sbjct: 537  RHRDGKWRRFEIREQALARDKHDQVTRIIGVAKDITDQIEASESLRDSEQRYRMLAESIS 596

Query: 175  EGIYQSTPDGTYLDVNPALARIYGY--------------ASPAELIAHFT--DIASQLYV 218
            + I+ +    +   V+P++  + GY              A+P +L   ++  D  S+   
Sbjct: 597  DVIFSTDSKLSLNYVSPSVNAVLGYDVDWIFQNGWQSTIANPQQLTGIYSLMDRVSK--- 653

Query: 219  DGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEVLYYEGTVEDIT 278
                + E    +R   + + F  +  R DG  I I      V           G   DI+
Sbjct: 654  -ALDKPEQLAQLRSQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDIS 712

Query: 279  AQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGL-LRQDMEGRPARLFA 337
             QR++++ +R+   VF      I++ +    +   N AF  ++G  + Q ++  P  L  
Sbjct: 713  QQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYEVAQVLDQLPNMLTV 772

Query: 338  SGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAIT 397
                E   L  V  ++ +   W GE+W +RR G  Y   + +TAV    G+   YV   +
Sbjct: 773  DDQQEAH-LRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFS 831

Query: 398  DITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQ 457
            DI++RK  E+ I   A +D LTHLPNR L  DRL  A+  A+R    V +MFLDLDRFK 
Sbjct: 832  DISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKP 891

Query: 458  INDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQ----HAGAYIA 513
            INDS GH+AGD +LK  A RL  CV   D+V R+GGDEF ++L     +    +   ++A
Sbjct: 892  INDSLGHAAGDRMLKEMATRLLACVDDDDTVARMGGDEFTLLLQPRASREIALNRAIHVA 951

Query: 514  EKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAI 573
            E+IL SL +PF + G E F   S+GI   P  G     L++NAD AMYHAK+ G+  +  
Sbjct: 952  EQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQF 1011

Query: 574  FTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRAD-LTLIGAEALIRWRHPEKGLI 632
            +  DM   +L  L +ESDLRHAL ++EF L++QP+   D   L GAEAL+RWRHP +GL+
Sbjct: 1012 YQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLV 1071

Query: 633  NPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVET 692
             PGDFIP+ EE GL++ +G W + EAC ++ +W    + +P VSVN+S RQF D  L   
Sbjct: 1072 PPGDFIPVLEELGLVVDVGDWVISEACRQLKTWHQAKVRVPKVSVNISARQFSDGQLGTR 1131

Query: 693  VRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYL 752
            +  IL +TGL P  L+LE+TE+++  +V  A+  L  LK+LG+++++DDFGTGYSSLNYL
Sbjct: 1132 IATILKDTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYL 1191

Query: 753  KTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRD 812
            K FPID LKID+TFV  +    +DA I   IIA+A +L  +V+AEGVE  EQ +FL    
Sbjct: 1192 KQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHG 1251

Query: 813  CQNFQGFLYSRPLPPAEF 830
            C   QG+L+ RP+P A F
Sbjct: 1252 CDEVQGYLFGRPMPAARF 1269