Pairwise Alignments
Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H
Subject, 1247 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2E3
Score = 496 bits (1276), Expect = e-144
Identities = 303/810 (37%), Positives = 441/810 (54%), Gaps = 14/810 (1%)
Query: 32 IAEGLSAALFQSVVEALPVGTALLRDGVIVHANATLAGQIGETIDTLIGSPLTSYLTPAD 91
++E A++FQ + L + A L DG ++ N QIG T +IG T +
Sbjct: 434 LSEQKFASVFQQCPDILVI--ARLSDGCLLEVNEAFEEQIGLTAGEVIGRTATEL----N 487
Query: 92 ALAVQKVVEGAIALHGGVPVRRIAH-IRHISGSERVYSLRFSPLDNGPHPLLVVITRDMT 150
+ V G + +R + R +G + P P LVV+ RD++
Sbjct: 488 IWGIAGVGPGLLQRLQAGSIRNLEMPFRRSNGQVFTGLISAEPFQLDTTPALVVVVRDIS 547
Query: 151 AQVAAENALRAAEGKYRAIFENAVEGIYQS-TPDGTYLDVNPALARIYGYASPAELIAHF 209
+ L+ +E K+ F + +G+ S DG ++VN +RI G+ S L
Sbjct: 548 QLKETQQQLQTSEEKFAKAFHASPDGLLLSRVSDGLLIEVNEGFSRITGFNSAMSLDRST 607
Query: 210 TDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEVLY 269
D+ ++V+ +R + L++ G VRDF+ + R DG ++R + D++ +
Sbjct: 608 FDLG--IWVNLNERRQMLDLLKRDGFVRDFSCHIRRNDGQIRLCEMSSRPLPIGDDDCML 665
Query: 270 YEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDME 329
DIT + QE ++ VF S AEG+++ + + VN AF +TG +
Sbjct: 666 T--IARDITERHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSETEAL 723
Query: 330 GRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGET 389
G RL ASGLH++ F A + ++ G W+GEI R+ G Y +T++AVR +
Sbjct: 724 GHTPRLLASGLHDSAFYAAMWHQLTAEGHWQGEISNRRKNGELYPSWLTISAVRNKDRFI 783
Query: 390 THYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMF 449
TH+VA DI+ K + + +QA+ D LT LPNR L RL A++ Q G Q V+F
Sbjct: 784 THFVAVFADISSLKHAQAKLDYQAHHDPLTGLPNRTLFESRLLTALNNQQENGGQGAVLF 843
Query: 450 LDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAG 509
LDLDRFK INDS GH GD +LK A RL+ +R D+V RLGGDEFI++L ++
Sbjct: 844 LDLDRFKHINDSLGHPVGDLLLKGIAVRLKEQLRDIDTVARLGGDEFIILLPGLQQASDA 903
Query: 510 AYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGER 569
+IA K+L + PF G E F S+G + +P+ G L++NAD AMY +K G
Sbjct: 904 DHIANKLLNCFTAPFQAGEHEFFISASIGTSLYPNDGIDVATLVKNADAAMYRSKAKGRN 963
Query: 570 RYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRAD-LTLIGAEALIRWRHPE 628
R +T D+ ++ + +E +LR A+ R+E L +QPKV + L+GAEALIRWRHP
Sbjct: 964 RVESYTRDLTAQASERVALEHELRRAIERNELTLFYQPKVSLNHPRLVGAEALIRWRHPA 1023
Query: 629 KGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQT 688
G + P FIPLAEE+G+IL IG W L +AC ++ W + +SVN++ Q +
Sbjct: 1024 FGDVPPEHFIPLAEENGMILQIGDWVLEQACLQMHEWNQRYESFGPLSVNLAGAQLRQPN 1083
Query: 689 LVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSS 748
L+ + Q+L + L+P L LEITE + E A+ L LK LGV L+IDDFGTGYSS
Sbjct: 1084 LLVRIEQLLKDNRLKPGFLQLEITENFIMSQAEEALEVLHQLKRLGVQLAIDDFGTGYSS 1143
Query: 749 LNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFL 808
L+YLK P+D LKIDQ+FVR + DAAIV IIAL R++ F+++AEGVE Q +FL
Sbjct: 1144 LSYLKRLPLDFLKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETHAQQQFL 1203
Query: 809 GSRDCQNFQGFLYSRPLPPAEF-TTFLRTA 837
S C+ QG++ S PLP EF TFLR A
Sbjct: 1204 TSEGCEQIQGYIVSLPLPADEFAATFLRIA 1233
Score = 42.0 bits (97), Expect = 2e-07
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 11/197 (5%)
Query: 132 SPLDNGPHPLLVVITRDMTAQVAAENALRAAEGKYRAIFENAVE-GIYQSTPDGTYLDVN 190
S +++G P+L + D++ E ALR +E K+ ++F+ + + DG L+VN
Sbjct: 405 SLIEHGHEPILRGLMIDISEAKRTEEALRLSEQKFASVFQQCPDILVIARLSDGCLLEVN 464
Query: 191 PALARIYGYASPAELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHT 250
A G + E+I + + G G QRL + G +R+ R +G
Sbjct: 465 EAFEEQIGLTA-GEVIGRTATELNIWGIAGVGPGLLQRL--QAGSIRNLEMPFRRSNGQV 521
Query: 251 IWITENARCVRGPDNEVLYYEGTVEDIT----AQRQSQETMRLLGKVFTSIAEGIVLLE- 305
+A + L V DI+ Q+Q Q + K F + +G++L
Sbjct: 522 FTGLISAEPFQLDTTPALVV--VVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRV 579
Query: 306 RDLTVRTVNPAFEAMTG 322
D + VN F +TG
Sbjct: 580 SDGLLIEVNEGFSRITG 596