Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  456 bits (1172), Expect = e-132
 Identities = 239/557 (42%), Positives = 339/557 (60%), Gaps = 1/557 (0%)

Query: 288 RLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLA 347
           RL   VF + +E I++ + +  +  VNPAF  +TG  R ++ GR  R+  SG+    F  
Sbjct: 154 RLATTVFHASSEAIMITDAENRIVDVNPAFTRITGFSRGEVLGRNPRILQSGIQSEHFYR 213

Query: 348 TVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEE 407
            + A +++ G WRGEIW  RR G  Y   + V  V +  G   +YVA  +DI++RK  E 
Sbjct: 214 EMWAAINQYGHWRGEIWNRRRNGELYPEWLAVDRVLSPEGAVLNYVAMWSDISERKEAEA 273

Query: 408 HIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAG 467
            I + A++D LT LPNR L  DR  QA+  A+R  + V +MF+DLDRFK +ND+ GH  G
Sbjct: 274 RIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYDQSVALMFVDLDRFKVVNDTLGHRVG 333

Query: 468 DEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIG 527
           DE+LK  A RLR CVR  D+V R GGDEF+V+L+N++     A +++KIL +L+EP    
Sbjct: 334 DELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLDMSADAAVVSDKILEALAEPMYFE 393

Query: 528 GTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLT 587
           G E+    S+GI  +P  G     L++NAD+AMY AK  G   Y  F+P++ + +L  LT
Sbjct: 394 GHELSVTCSIGIACYPSDGADPDTLMKNADLAMYRAKSVGRNNYQFFSPELEQGALTRLT 453

Query: 588 MESDLRHALARDEFELHFQPKV-RADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGL 646
           +E+ +R AL RDEFELH+ P+V      L+  EALIRW+HPE+GL+ P  FIPLAEESGL
Sbjct: 454 LENAMRRALDRDEFELHYLPQVDNPSGRLLSLEALIRWQHPERGLLLPSQFIPLAEESGL 513

Query: 647 ILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEA 706
           +LPI  W LR    ++  WR + LT+  V++N+   Q +     E + +IL E G+E   
Sbjct: 514 VLPISLWVLRRVARQLADWRRQNLTLVPVAINLCEAQLRQPDFAEALGRILSEEGVEGRW 573

Query: 707 LDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTF 766
           ++LE TE  +  D E  +  L ALK LGV +++DDFG GYS+LN L+  P+DTLKID++ 
Sbjct: 574 IELEFTEGALMHDTERNLRVLSALKRLGVGITLDDFGVGYSNLNVLRRLPVDTLKIDRSL 633

Query: 767 VRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLP 826
           V DV  +  DA IV  II++A+++   VVAEGVE  +QA F  +R C   QG  +S+ + 
Sbjct: 634 VTDVTRNEDDAVIVDAIISMAQSMNLKVVAEGVETADQAGFFKARACAEIQGHFFSKAIG 693

Query: 827 PAEFTTFLRTAKLETAT 843
             E    L  A    +T
Sbjct: 694 AVEVAAMLGHAPAAAST 710



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 140 PLLVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGY 199
           PL      +  A  A    L +       +F  + E I  +  +   +DVNPA  RI G+
Sbjct: 130 PLKASALLEAMATCARAARLESEHRLATTVFHASSEAIMITDAENRIVDVNPAFTRITGF 189

Query: 200 ASPAELIAHFTDIASQLYVDGTKRGEFQRLM-RETGEVRDFTAEVW--RCDG--HTIWIT 254
            S  E++        ++   G +   F R M     +   +  E+W  R +G  +  W+ 
Sbjct: 190 -SRGEVLGR----NPRILQSGIQSEHFYREMWAAINQYGHWRGEIWNRRRNGELYPEWLA 244

Query: 255 ENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLL 290
            +   V  P+  VL Y     DI+ +++++  +  L
Sbjct: 245 VDR--VLSPEGAVLNYVAMWSDISERKEAEARIHYL 278