Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  443 bits (1140), Expect = e-128
 Identities = 262/674 (38%), Positives = 374/674 (55%), Gaps = 16/674 (2%)

Query: 169 IFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDIASQLYVDGTKRGE--- 225
           I ++  + +      G  +  N    R++GY +   +  H   + +    DG++  E   
Sbjct: 163 ILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLYAD---DGSETLEEED 219

Query: 226 --FQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQS 283
             F     + G  R+F     +  G   W + +    R    E     G + DIT Q + 
Sbjct: 220 DLFYNAFLDHGR-REFEVRRRKKSGEVFWASVSLSLSRNEAGEPAGLIGYLVDITNQLER 278

Query: 284 QETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHEN 343
           +E +RL  K+F   +E +++ +    V +VN AF  +TG    ++      L      + 
Sbjct: 279 EEKLRLHAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSEAEVRMSLPALLQPTRDDP 338

Query: 344 DFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRK 403
           +  A +   +  +G W+GE+W  R+ G  Y   +++++V+   G  +HY    +DI++RK
Sbjct: 339 NLAAEIQVALASSGAWQGELWDRRKNGDTYPVWVSISSVKNTRGILSHYFLVFSDISERK 398

Query: 404 RDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYG 463
             E  I   A +D LT LPNR L+   LEQA+ +AQR      V+F+DLDRFK INDS+G
Sbjct: 399 EAERQIYRLAYYDALTGLPNRSLLFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDSFG 458

Query: 464 HSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEP 523
           H+  D +LK  ARRL+  +R  D V RLGGDEFIV L ++  +   A + +KIL +L+EP
Sbjct: 459 HAPADALLKEVARRLQETLRAEDVVARLGGDEFIVALFDITKREHAALVGQKILDALAEP 518

Query: 524 FPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQ--GGERRYAIFTPDMARR 581
           F I   EV    S+GI  FPD G  A  LLRNAD AMY  KQ  GG      ++ +M  R
Sbjct: 519 FQIVHHEVLLTASIGIAVFPDDGRDAETLLRNADTAMYRVKQTSGGP---LFYSQEMNLR 575

Query: 582 SLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPL 640
           SL  L +E  LR A+ R EF L++QP+V  A   ++GAEALIRW HPE+G+I P  FIPL
Sbjct: 576 SLERLKLEGALRKAVERQEFRLYYQPQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPL 635

Query: 641 AEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVET 700
           AEE+GLI+ IG W L  AC +   WR  G    +++VN+SPRQF+   L + V + L   
Sbjct: 636 AEETGLIVSIGAWVLDAACRQGRLWREAGYEDLTIAVNLSPRQFR-PGLSQLVNETLERH 694

Query: 701 GLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTL 760
               E L+LEITE ++  + E  +  L      GV L++DDFGTGYSSL YLK FPID L
Sbjct: 695 AFPGENLELEITEGMLMHNSEAVIQMLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNL 754

Query: 761 KIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFL 820
           KID++FV  + H G D+AI   II++A+NL   V+AEGVE  EQ +FL +  C   QG+L
Sbjct: 755 KIDRSFVSGIPHDGDDSAIAKAIISMAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYL 814

Query: 821 YSRPLPPAEFTTFL 834
           +S P+P  +F   L
Sbjct: 815 FSPPVPVEDFQLLL 828