Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  443 bits (1139), Expect = e-128
 Identities = 235/559 (42%), Positives = 336/559 (60%), Gaps = 5/559 (0%)

Query: 281 RQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGL 340
           R  ++ +RL   V     E + + + +  +  VN AF A+TG   +++ GR  R   SG 
Sbjct: 399 RSREDQLRLWASVLEQSREAVFVTDAENRILLVNRAFVAVTGYTLEEVRGRTPRFLQSGR 458

Query: 341 HENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDIT 400
           H+  F   +   +   G W+GEIW   ++G  +     ++AV   AG  ++Y+A  +D+T
Sbjct: 459 HDEAFYVNLWRSLRETGHWQGEIWDRAKDGRIHPQWAAISAVADAAGTVSNYIAIYSDLT 518

Query: 401 KRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQIND 460
           + K  ++ I+F A  D LT LPNR L+ DRL  A+  A R G +V V+F+DLDRFK IND
Sbjct: 519 EHKAAQDRIQFLAQHDPLTGLPNRMLLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTIND 578

Query: 461 SYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSL 520
           S GHS GDE++K   +RL++ VR SD+V RLGGDEFIV+L  +      A++A+ +L  L
Sbjct: 579 SLGHSVGDELIKGVTKRLQDAVRESDTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQL 638

Query: 521 SEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMAR 580
           + PF I G E+    S+GI+ FP  GE    L++NAD AM+HAK+ G   Y  F P+M  
Sbjct: 639 TAPFNIAGKELRVTASIGISVFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNA 698

Query: 581 RSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIP 639
           R+   L +E+ LR A+ R EF L +QP+V      L+GAEALIRWR  + G ++P DFIP
Sbjct: 699 RAGERLALENSLRGAVQRKEFVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIP 758

Query: 640 LAEESGLILPIGRWTLREACDRVM----SWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQ 695
           LAEE+G IL IG W L EAC + +     W A GL    V+VN+S  QF+ +   E +  
Sbjct: 759 LAEETGTILEIGDWVLAEACRQQVQWDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLD 818

Query: 696 ILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTF 755
           I+ +  L    ++LE+TE+++  + E     L  LK  G+ LSIDDFGTGYSSL+YLK F
Sbjct: 819 IVGDYPLPAGRIELELTESIVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRF 878

Query: 756 PIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQN 815
           P+D LKID +FVRD+++   D AIV  +++L  +LG  VVAEGVE   +   L +  C  
Sbjct: 879 PLDKLKIDASFVRDIVNDSADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDI 938

Query: 816 FQGFLYSRPLPPAEFTTFL 834
            QG+ + RP+P  EF  ++
Sbjct: 939 AQGYHFCRPVPAEEFQAWV 957