Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  496 bits (1277), Expect = e-144
 Identities = 290/712 (40%), Positives = 408/712 (57%), Gaps = 22/712 (3%)

Query: 135  DNGPHPLLVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALA 194
            D+G     +    D++     E ALR      + I EN  +G+    P+   +  N    
Sbjct: 572  DDGQLTGFITTYTDISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRMIACNERFR 631

Query: 195  RIYGYASPAELIAHFTDIASQLYVDGTKRGEF---------QRLMRETGEVRDFTAEVWR 245
             +     P  L A        +     +RGE+         + ++R      +      R
Sbjct: 632  TLLDL--PDTLFAQGYPTLEDMVRFNARRGEYGPGDEERRTRGVLRALQRPNNTAVLRER 689

Query: 246  CDGHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLE 305
             DG  + I +      G  + ++ Y     DITA+ +++  ++L  KVF +  E I++ +
Sbjct: 690  PDGTVLEIRQ---VNLGDGSTIIIYT----DITARHRAEAELKLAEKVFANSPEAIMICD 742

Query: 306  RDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWG 365
            +   + +VN AF  +TG  ++++ G+  R+ ASG H+ DF   +   +   G W GEIW 
Sbjct: 743  QGNRIISVNRAFCDITGYAQEEVLGQDPRMLASGRHDKDFYRQMWEILRDTGAWAGEIWD 802

Query: 366  ERREGPPYSGEMTVTAVR-TRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNR 424
             R+ G  Y   MT+ AV  T++G  THY+   +DIT+RK  E  I   A+ D LT LPNR
Sbjct: 803  RRKNGEIYPKWMTINAVHDTQSGALTHYITLFSDITERKETEARIHHLAHHDPLTGLPNR 862

Query: 425  HLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRI 484
              +  RLEQ++  A+R G +V VMF+DLDRFK INDS GH+ GD +L   A RLR+ VR 
Sbjct: 863  FTLEARLEQSLADARRHGHKVAVMFMDLDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRE 922

Query: 485  SDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPD 544
            SD+V RLGGDEF+V+L +VE  +  A++A KI+  ++    +G  E+    S+GI+ +PD
Sbjct: 923  SDTVARLGGDEFVVVLPDVEGANDAAHVAGKIIEDVARSLRVGAHELHTSASIGISLYPD 982

Query: 545  HGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELH 604
             GET P +++NAD AMYHAK  G   +  F   M R +   L +E  LR A+  DE ELH
Sbjct: 983  DGETVPTVMQNADTAMYHAKAIGRNNFQFFASAMNRAATERLELERKLRQAMVNDELELH 1042

Query: 605  FQPK--VRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRV 662
            FQP+  + AD  + G EAL+RWRHPE GLI P  FIP+AEE+GLI+ IG W L+ AC ++
Sbjct: 1043 FQPQFALAAD-RVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAACRQL 1101

Query: 663  MSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEH 722
             +W  +GL    ++VN+S RQ +++     V  IL ETGL    L+LEITE+ +    E 
Sbjct: 1102 KAWLDQGLPPLRMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMERPEE 1161

Query: 723  AVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVST 782
            A+ TL+AL D+GVTL+IDDFGTGYSSL+YLK FPID LKID++FVRD+     DAAI   
Sbjct: 1162 AITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAIARG 1221

Query: 783  IIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFL 834
             IALA +LG  VVAEGVE   Q + L +  C   QG+ +SRPLP A  T FL
Sbjct: 1222 TIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQGYFFSRPLPLAAATAFL 1273



 Score = 30.4 bits (67), Expect = 7e-04
 Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 25/206 (12%)

Query: 146 TRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAEL 205
           T+D+T +  AE   R    + RA+ +N  +GI            N  +  + G   PAE 
Sbjct: 452 TQDITERKLAEEEYRRQSTQLRAVLQNMPQGISVFDEHLRLQLWNEGMREVLGL--PAEA 509

Query: 206 I---AHFTDIASQ-----LYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENA 257
           +     F D+         Y  G      Q       + +    E  R DG T  +    
Sbjct: 510 LYRGVPFEDLVRYPAQRGEYGPGDPEQHVQERKALAMQFKPHRFERTRLDGRTTLVQGEP 569

Query: 258 RCVRGPDNEVLYYEGTVEDITAQRQSQETMR----LLGKVFTSIAEGIVLLERDLTVRTV 313
                 D ++  +  T  DI+  +++++ +R    +L  +  ++ +G+ L + +  +   
Sbjct: 570 LF---DDGQLTGFITTYTDISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRMIAC 626

Query: 314 NPAFEAMTGLLRQDMEGRPARLFASG 339
           N  F  +  L        P  LFA G
Sbjct: 627 NERFRTLLDL--------PDTLFAQG 644