Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1126 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  485 bits (1249), Expect = e-141
 Identities = 302/834 (36%), Positives = 442/834 (52%), Gaps = 18/834 (2%)

Query: 12   FADHASAAEDREAGDGPAPSIAEGLSAALFQSVVEALPVGTALLRDGVIVHANATLAGQI 71
            F    +A   RE  +      +   S   F+++ E  P  T ++R G    ANA      
Sbjct: 297  FIRERNAELSREIAERKEIQASLAQSEGRFRTLFEHSPDPTWIVRQGCFSEANAAALEMF 356

Query: 72   G-ETIDTLIG-SPLTSYLTPADALAVQKVVEGA-----IALHGGVPVRRIAHIRHISGSE 124
            G +      G SP+   L+PA     Q   E A     IA+  G+      H R   GS 
Sbjct: 357  GFKDFSQFRGISPID--LSPARQPDGQTSAEKAKAMMEIAVARGLHRFEWTHQR-CDGSL 413

Query: 125  RVYSLRFSPLDNGPHPLLVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDG 184
                +  S +     P+L  + RD++ +  AE  L        AI ++A   IY    +G
Sbjct: 414  FPAEVTLSAMQLNELPVLHAVVRDISERKQAEAELERQRSLLGAIVDHAPSLIYMFDTEG 473

Query: 185  TYLDVNPALARIYGYASPA-ELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEV 243
                 N    ++ G    A E +   + I+  L V      E   L+ ++G+   F  + 
Sbjct: 474  RLRLGNRLFEKVIGRPRAAVEGLLRESFISPALAVQHRHNDE---LVMQSGQPMRFEEQA 530

Query: 244  WRCDGHTIWITENARC-VRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIV 302
            +       ++T   +C + GPD  +    G   DIT  +Q+ E +RL G V  + A+G++
Sbjct: 531  FDGGVQRTYLT--TKCPLPGPDGSLRGVLGISTDITEIKQTTEQLRLAGVVMENTADGVM 588

Query: 303  LLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGE 362
            + +    + +VN AF  +TG    +  G+   L  S   E +F   +   +   G+WRGE
Sbjct: 589  ITDARGVILSVNKAFTDITGYTAAEALGQLPSLLRSDRQEPEFYRLMWETLASTGIWRGE 648

Query: 363  IWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLP 422
            IW  R+ G  +   +T+ AV  + G+  +YV   +DI+  K  ++ +   A+FD LT LP
Sbjct: 649  IWNRRKNGALFPEWLTINAVLDQEGKPVNYVGVFSDISAIKHSQDELERLAHFDPLTGLP 708

Query: 423  NRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCV 482
            NR L  DRL+ A+ +AQR G+++ V+ LDLD FK +NDS GH  GD +L+  A R + CV
Sbjct: 709  NRTLFHDRLQHALERAQRYGQELAVLLLDLDGFKTVNDSLGHPTGDLLLQQAAHRFKECV 768

Query: 483  RISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYF 542
            R+ D+V RLGGDEF +IL+N+        + +K+L +L EPF + GT      S+GI   
Sbjct: 769  RVEDTVSRLGGDEFAIILNNLAQGTDAISVVKKLLQALQEPFDLDGTAALVTTSIGIAIA 828

Query: 543  PDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFE 602
            P  G+T   L+RNAD AMY AK+GG   Y  +  DM RR+   LT E  LR AL   EFE
Sbjct: 829  PLDGDTPEALVRNADTAMYGAKEGGRNSYRFYQADMTRRAQERLTQERSLRRALEEGEFE 888

Query: 603  LHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDR 661
            + +QPK+  AD +L GAEAL+RWR P +GL++P +FIPLAE +GLI+PIG   L + C +
Sbjct: 889  VWYQPKLELADGSLCGAEALLRWRDPARGLVSPAEFIPLAERTGLIVPIGELVLDQVCRQ 948

Query: 662  VMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVE 721
               W   GL    ++VNV+  Q +      T+RQ L + GL   AL++E+TE+++     
Sbjct: 949  ARQWADRGLLAGRIAVNVAALQIERSDYAATLRQALEKHGLPATALEVEVTESLIMESPN 1008

Query: 722  HAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVS 781
            HA   L  ++ LGVT ++DDFGTGYSSL YLK  PI+ LKID+ FV D+ H+  D AI  
Sbjct: 1009 HARQVLCDIQTLGVTTAVDDFGTGYSSLAYLKVLPINHLKIDRAFVADLPHNANDVAIAR 1068

Query: 782  TIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLR 835
             IIAL  +LGF + AEG+E  EQ EFL    C   QG+L+ RP+P A+FT +++
Sbjct: 1069 AIIALGHSLGFHITAEGIETQEQLEFLRGAGCDQGQGYLFGRPMPAADFTAWMQ 1122