Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  446 bits (1147), Expect = e-129
 Identities = 259/696 (37%), Positives = 379/696 (54%), Gaps = 8/696 (1%)

Query: 145 ITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAE 204
           + R   A   A+  L+        + E     ++     G Y+  N A     G      
Sbjct: 258 LARKQDALQQADAQLQEHVQFMHTLIEAIPSPLFYKDAQGRYVGCNEAFLTYLGKERHEL 317

Query: 205 LIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPD 264
           L     D+A +   D     + Q       +V  + ++    DG    +  N       +
Sbjct: 318 LGKSVYDLAPKELADIYAAADRQLFDNPGKQV--YESQACYADGSKHDVIYNKATFMDAE 375

Query: 265 NEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLL 324
             V    G + DIT +++ +E +RL  KVF +  E  ++ + D  +R+VN AF   TG  
Sbjct: 376 GRVAGLVGVMVDITERKRQEEELRLAAKVFDTSNEAFLVTDADNNIRSVNRAFCETTGYS 435

Query: 325 RQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRT 384
            +++ GR  RL +SG H+  F   +   ++  G W+GEI+  R+ G  Y     +  V+ 
Sbjct: 436 AEEVLGRNPRLLSSGHHDKTFYRQMWEALNSQGYWQGEIYDRRKSGEIYPKWTRINVVKD 495

Query: 385 RAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTG-- 442
             G   ++VA  +DI+ RK  EE ++F A  D LT LPNR+L+  RLEQA+  A   G  
Sbjct: 496 DQGRVVNHVAVFSDISDRKALEERLQFLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAG 555

Query: 443 --RQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVIL 500
               V ++ LDLD FK INDS GH AGD++L+   +RL+N +R S ++ R GGDEF+++L
Sbjct: 556 GINPVALLLLDLDHFKTINDSLGHHAGDQLLRTVVKRLKNILRESSTLCRQGGDEFLIVL 615

Query: 501 SNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAM 560
              +D    +  AE +L +L+ PF + G  +    S+GI+  PD G     LL+ AD A+
Sbjct: 616 PQAQDLARVSRAAETVLAALATPFEVDGHPLSITGSIGISLAPDDGSDFDTLLKKADTAL 675

Query: 561 YHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAE 619
            HAKQ G   Y  FT  M   +L  LT++  L  AL R E  L++QP++  A   ++G E
Sbjct: 676 VHAKQSGRNAYRFFTEAMNVSTLERLTLQQRLHQALERQELVLYYQPQLDLASGRVVGVE 735

Query: 620 ALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNV 679
           AL+RWR PE GL+ PG FIPLAEE+GLI+P+G W ++EAC +  +W   GL   +++VN+
Sbjct: 736 ALLRWRTPE-GLVPPGKFIPLAEETGLIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNL 794

Query: 680 SPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSI 739
           S  QF    L+ TV   L    L   +L+LE+TE+++  D E  + TL+A+  +GV LSI
Sbjct: 795 SALQFHRDNLLITVGDALSAASLPAASLELELTESILIQDAEATLATLKAMNAMGVLLSI 854

Query: 740 DDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGV 799
           DDFGTGYSSL YLK F +D LKIDQ+FVRD+   G  AAIV  ++ +A +L    +AEGV
Sbjct: 855 DDFGTGYSSLAYLKRFTVDKLKIDQSFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGV 914

Query: 800 EEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLR 835
           E   QA  L +  C   QG+LY+RP+P AE   +LR
Sbjct: 915 ETESQAAALRATGCDEVQGYLYARPMPAAECEAYLR 950