Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  463 bits (1191), Expect = e-134
 Identities = 257/665 (38%), Positives = 375/665 (56%), Gaps = 10/665 (1%)

Query: 169 IFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDIASQLYVDGTKRGEFQR 228
           I     EGI      G     N     + G A+P  L+    D A+ L+  G    E   
Sbjct: 293 IANTLAEGILALDRGGRITFANQRAEALLG-AAPGGLLGR--DAATVLW-PGAAPAEVSG 348

Query: 229 LMRE--TGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEV--LYYEGTVEDITAQRQSQ 284
           L R   TG V +   +  R DG    +      +RG + +     Y  +  DI+  +Q++
Sbjct: 349 LARALATGAVFEGEDDFVRSDGSAFPVAVLGAPLRGGEGDADQAGYVASFRDISEIKQAE 408

Query: 285 ETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGR-PARLFASGLHEN 343
             + L  +VF S+ E +V+ +    +++VNPAF  +TG    D  GR P  + ASG H+ 
Sbjct: 409 ARLHLAARVFDSLGEAMVVTDARGRIQSVNPAFSEVTGYSEADARGRAPGHILASGQHDP 468

Query: 344 DFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRK 403
            F A +   +   G W+GE+   R+ G  Y   +++TA++  AG+ + YV   TDIT RK
Sbjct: 469 AFYAQMWQSLQEQGKWQGEVINRRKSGETYPEWLSITAIKDGAGQVSQYVGLFTDITDRK 528

Query: 404 RDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYG 463
           + E HI   A  D LT LPNR L  DRLE A+ QA R+ R++ V+ LDLDRFK +ND+ G
Sbjct: 529 QAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAVNDTLG 588

Query: 464 HSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEP 523
           H  GD +LK    RL  C+R  D++ RLGGDEF+++L  V      + +A K+L    +P
Sbjct: 589 HDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQP 648

Query: 524 FPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSL 583
             +G  E+F   S+GI  +P  GE    LL++ADVAMY AK GG   Y  F      RSL
Sbjct: 649 VRLGEREIFASTSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASHNERSL 708

Query: 584 ALLTMESDLRHALARDEFELHFQPKVRADL-TLIGAEALIRWRHPEKGLINPGDFIPLAE 642
             L +E+DLR A+  ++  L++QP++ A    + G EAL+RWRHP +GL+ P  FI LAE
Sbjct: 709 ERLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSFIALAE 768

Query: 643 ESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGL 702
            +GLI  IG W L  AC ++ +W+ +G+ +P V+VNVS RQ +     + V Q++ ++G+
Sbjct: 769 NAGLIDAIGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVVTQSGI 828

Query: 703 EPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKI 762
           +P  L+LE+TE+ +  D E  +     L+  GV +SIDDFGTGYSSL+YL  +P+D +KI
Sbjct: 829 DPAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKI 888

Query: 763 DQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYS 822
           D++FV  +L   +  ++V  +I LA  LG   VAEGVE   Q + L   DC   QG+L+S
Sbjct: 889 DRSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFS 948

Query: 823 RPLPP 827
           +P+PP
Sbjct: 949 KPVPP 953



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 290 LGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATV 349
           L  +  ++AEGI+ L+R   +   N   EA+ G     + GR A            ++ +
Sbjct: 290 LDNIANTLAEGILALDRGGRITFANQRAEALLGAAPGGLLGRDAATVLWPGAAPAEVSGL 349

Query: 350 AAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTH--YVAAITDITKRKRDEE 407
           A  +    ++ GE    R +G  +   +    +R   G+     YVA+  DI++ K+ E 
Sbjct: 350 ARALATGAVFEGEDDFVRSDGSAFPVAVLGAPLRGGEGDADQAGYVASFRDISEIKQAEA 409

Query: 408 HIRFQAN-FDML 418
            +   A  FD L
Sbjct: 410 RLHLAARVFDSL 421